G748432


Basic Information

Item Value
gene id G748432
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 76706730 ~ 76708278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU849630
ggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatata
>TU849631
ggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggagactatata
>TU849632
ggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagagggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatatgg
>TU849633
ggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagagggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU849630 False 262 lncRNA 0.49 3 76706730 76707888
TU849631 False 262 lncRNA 0.48 3 76706730 76708278
TU849632 False 447 TUCP 0.49 3 76706730 76707644
TU849633 True 340 lncRNA 0.49 3 76706730 76707888

Neighbor

gene id symbol gene type direction distance location
LOC110530655 LOC106569480 coding upstream 253354 76451222 ~ 76453376 (+)
LOC110529140 NA coding upstream 281669 76423116 ~ 76425061 (+)
LOC110530654 LOC106569481 coding upstream 300211 76390062 ~ 76406519 (+)
LOC110530652 LOC106569481 coding upstream 328932 76365091 ~ 76377798 (+)
LOC110530653 LOC106569481 coding upstream 380187 76321125 ~ 76326543 (+)
LOC110530659 LOC106569500 coding downstream 311183 77019461 ~ 77046447 (+)
LOC118965635 NA coding downstream 378857 77087135 ~ 77090382 (+)
slc25a12 LOC106569494 coding downstream 419208 77127486 ~ 77155564 (+)
LOC110530663 LOC105020301 coding downstream 473586 77181864 ~ 77210814 (+)
LOC110530673 NA coding downstream 604123 77312401 ~ 77344087 (+)
G748384 NA non-coding upstream 98917 76606811 ~ 76607813 (+)
LOC110530656 LOC106600124 non-coding upstream 162204 76526810 ~ 76720528 (+)
G748318 NA non-coding upstream 202924 76503349 ~ 76503806 (+)
G748316 NA non-coding upstream 203966 76502310 ~ 76502764 (+)
G748312 NA non-coding upstream 207842 76498675 ~ 76498888 (+)
G748577 NA non-coding downstream 49238 76757516 ~ 76757737 (+)
G748587 NA non-coding downstream 56695 76764973 ~ 76765288 (+)
G748590 NA non-coding downstream 57541 76765819 ~ 76766048 (+)
G748724 NA non-coding downstream 160440 76868718 ~ 76868973 (+)
G748727 NA non-coding downstream 162273 76870551 ~ 76870773 (+)
G747987 cah12 other upstream 312401 76239950 ~ 76394329 (+)
G747680 NA other upstream 590744 76115693 ~ 76115986 (+)
G746951 LOC106591969 other upstream 1323602 75379450 ~ 75383243 (+)
LOC110530987 LOC106569478 other upstream 1349573 75151419 ~ 75357954 (+)
G748905 NA other downstream 442385 77150663 ~ 77177349 (+)
G748917 NA other downstream 471066 77179344 ~ 77180128 (+)
G748959 LOC106569508 other downstream 558374 77266652 ~ 77272660 (+)
G749137 NA other downstream 594459 77302737 ~ 77382611 (+)
LOC110530993 LOC106569518 other downstream 1175959 77863590 ~ 77887401 (+)

Expression


Co-expression Network