G748889


Basic Information

Item Value
gene id G748889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77110471 ~ 77110683 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU850135
ATCCACTTCACTCCTTCTTTGTGCATCCTGTCTTTTCAGCAGAAGGGAATTATGCTTCTCCTTAGCAAGGTGTCGCCTAGATAAATCTGATCATCTGTTCTATAAATCACCTGATATACAGTTAACTGAGCATCACCAAATCAATCAGTGAAATGCATTTACATCAGTAGTTGTtgcaaagtgcttatacagaaaccgagcctaaaaccccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU850135 True 213 lncRNA 0.40 1 77110471 77110683

Neighbor

gene id symbol gene type direction distance location
LOC118965635 NA coding upstream 21166 77087135 ~ 77090382 (+)
LOC110530659 LOC106569500 coding upstream 64024 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 389943 76526810 ~ 76720528 (+)
LOC110530655 LOC106569480 coding upstream 657095 76451222 ~ 76453376 (+)
LOC110529140 NA coding upstream 685410 76423116 ~ 76425061 (+)
slc25a12 LOC106569494 coding downstream 16803 77127486 ~ 77155564 (+)
LOC110530663 LOC105020301 coding downstream 71181 77181864 ~ 77210814 (+)
LOC110530673 NA coding downstream 201718 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 261504 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 274898 77385581 ~ 77386837 (+)
G748846 NA non-coding upstream 83094 77027163 ~ 77027377 (+)
G748845 NA non-coding upstream 84759 77025374 ~ 77025712 (+)
G748826 NA non-coding upstream 114533 76993282 ~ 76995938 (+)
G748793 NA non-coding upstream 177155 76932724 ~ 76933316 (+)
G748890 NA non-coding downstream 206 77110889 ~ 77111108 (+)
G748900 NA non-coding downstream 23086 77133769 ~ 77134439 (+)
G748903 NA non-coding downstream 32521 77143204 ~ 77173163 (+)
G748904 NA non-coding downstream 33595 77144278 ~ 77144646 (+)
G748919 NA non-coding downstream 69914 77180597 ~ 77181296 (+)
G748432 NA other upstream 402827 76706730 ~ 76708278 (+)
G747987 cah12 other upstream 716142 76239950 ~ 76394329 (+)
G747680 NA other upstream 994485 76115693 ~ 76115986 (+)
G746951 LOC106591969 other upstream 1727343 75379450 ~ 75383243 (+)
G748905 NA other downstream 39980 77150663 ~ 77177349 (+)
G748917 NA other downstream 68661 77179344 ~ 77180128 (+)
G748959 LOC106569508 other downstream 155969 77266652 ~ 77272660 (+)
G749137 NA other downstream 192054 77302737 ~ 77382611 (+)
LOC110530993 LOC106569518 other downstream 773554 77863590 ~ 77887401 (+)

Expression


Co-expression Network