G748919


Basic Information

Item Value
gene id G748919
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77180597 ~ 77181296 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU850178
cttggaaaacaacaggtatagactaacagtgaaatgcttacgggcccttcccaacaatgtagagagaaagagaaataatagataagtaataataaatacacaatagtGAGTACGTGTGTGATGATCATCTTAACCATTCTCTATGATAACTTTGTGCTGTCAGAATCATATAGACTTATCTGTTACCGAGAGAGCTCGTCAGTGGAACCCACAGTGAGTCTGTTGTTAtgttatttaacatttattttatcagggagtcatactgagaccaagttctcttttacagatgagctcTGAATATCAGAAATGAtagaaaatacacacatcaacGTTGTTCAGTCTGCCATTAACCTGCCTTCGCCTGGTCGGCTCCATTTGGGTGTAAAGAGTTAAGTCACCCAATGaccaacacaaacacatccaaataaaggtgtgagtgtgtgtgtgtgtgtgtgaattccaCAGTGACGTCACAAAAGCTTCACCACAACAACATAACATATAGACCTAGCTGGCTGATGCATTGCACCAGATTTGGAACAAAGCATTTTCTCCATCTGTAGATCATAACATTGTCCTCCTTCATCAAGCATGTTCACTTCTTTTTTTATAAGATTCATTTTTAATATGGGCCAATACAACAATACTCATGTTTTCAACTTGCCAGTGTGTAGTGGAATTCAACCATgcacacagccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU850178 True 700 lncRNA 0.39 1 77180597 77181296

Neighbor

gene id symbol gene type direction distance location
slc25a12 LOC106569494 coding upstream 25033 77127486 ~ 77155564 (+)
LOC118965635 NA coding upstream 91292 77087135 ~ 77090382 (+)
LOC110530659 LOC106569500 coding upstream 134150 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 460069 76526810 ~ 76720528 (+)
LOC110530655 LOC106569480 coding upstream 727221 76451222 ~ 76453376 (+)
LOC110530663 LOC105020301 coding downstream 568 77181864 ~ 77210814 (+)
LOC110530673 NA coding downstream 131105 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 190891 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 204285 77385581 ~ 77386837 (+)
LOC110530677 LOC106569510 coding downstream 281507 77462803 ~ 77467237 (+)
G748903 NA non-coding upstream 7434 77143204 ~ 77173163 (+)
G748904 NA non-coding upstream 35951 77144278 ~ 77144646 (+)
G748900 NA non-coding upstream 46158 77133769 ~ 77134439 (+)
G748890 NA non-coding upstream 69489 77110889 ~ 77111108 (+)
G748889 NA non-coding upstream 69914 77110471 ~ 77110683 (+)
G748895 NA non-coding downstream 29886 77211182 ~ 77212460 (+)
G748930 NA non-coding downstream 34646 77215942 ~ 77216154 (+)
G748931 NA non-coding downstream 35220 77216516 ~ 77217032 (+)
G748933 NA non-coding downstream 39775 77221071 ~ 77221307 (+)
G748935 NA non-coding downstream 41061 77222357 ~ 77222866 (+)
G748917 NA other upstream 469 77179344 ~ 77180128 (+)
G748905 NA other upstream 3248 77150663 ~ 77177349 (+)
G748432 NA other upstream 472953 76706730 ~ 76708278 (+)
G747987 cah12 other upstream 786268 76239950 ~ 76394329 (+)
G748959 LOC106569508 other downstream 85356 77266652 ~ 77272660 (+)
G749137 NA other downstream 121441 77302737 ~ 77382611 (+)
LOC110530993 LOC106569518 other downstream 702941 77863590 ~ 77887401 (+)
G749663 tcf3 other downstream 1062914 78244210 ~ 78245615 (+)
G750533 LOC106569543 other downstream 1615846 78797142 ~ 78797548 (+)

Expression


Co-expression Network