G748931


Basic Information

Item Value
gene id G748931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77216516 ~ 77217032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU850190
tgattacacacaggtggattgtatttatcatcattagtcatttaggtcaatattgtatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgattcaagggggccgaatactttcgcaaggcactgtacagggggtaccagggaacagagtcaatgtggaggttatatacagggggtactggtacagagttaatgtggaggctatatacagggggtaccagggaacagagtcaatgtggaggctatatacagggggtaccagggaacagagttaatgtggaggctatatacagggggtaccaggggacagagtcaatgtggaggctatatacagggtgtaccagggaacagagttaatgtggagactatatacagggggtaccaggacagagtcaatgtggagactatatacagggggtaccagggaacagagttaatgtggaggctatatacgggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU850190 True 517 lncRNA 0.46 1 77216516 77217032

Neighbor

gene id symbol gene type direction distance location
LOC110530663 LOC105020301 coding upstream 5702 77181864 ~ 77210814 (+)
slc25a12 LOC106569494 coding upstream 60952 77127486 ~ 77155564 (+)
LOC118965635 NA coding upstream 127211 77087135 ~ 77090382 (+)
LOC110530659 LOC106569500 coding upstream 170069 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 495988 76526810 ~ 76720528 (+)
LOC110530673 NA coding downstream 95369 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 155155 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 168549 77385581 ~ 77386837 (+)
LOC110530677 LOC106569510 coding downstream 245771 77462803 ~ 77467237 (+)
LOC110530678 LOC106569511 coding downstream 261315 77478347 ~ 77541551 (+)
G748930 NA non-coding upstream 362 77215942 ~ 77216154 (+)
G748895 NA non-coding upstream 4056 77211182 ~ 77212460 (+)
G748919 NA non-coding upstream 35220 77180597 ~ 77181296 (+)
G748903 NA non-coding upstream 43353 77143204 ~ 77173163 (+)
G748904 NA non-coding upstream 71870 77144278 ~ 77144646 (+)
G748933 NA non-coding downstream 4039 77221071 ~ 77221307 (+)
G748935 NA non-coding downstream 5325 77222357 ~ 77222866 (+)
G748945 NA non-coding downstream 18375 77235407 ~ 77235632 (+)
G748946 NA non-coding downstream 19277 77236309 ~ 77236586 (+)
G748951 NA non-coding downstream 29169 77246201 ~ 77264007 (+)
G748917 NA other upstream 36388 77179344 ~ 77180128 (+)
G748905 NA other upstream 39167 77150663 ~ 77177349 (+)
G748432 NA other upstream 508872 76706730 ~ 76708278 (+)
LOC110530655 LOC106569480 other upstream 764079 76451222 ~ 76453376 (+)
G747987 cah12 other upstream 822187 76239950 ~ 76394329 (+)
G748959 LOC106569508 other downstream 49620 77266652 ~ 77272660 (+)
G749137 NA other downstream 85705 77302737 ~ 77382611 (+)
LOC110530993 LOC106569518 other downstream 667205 77863590 ~ 77887401 (+)
G749663 tcf3 other downstream 1027178 78244210 ~ 78245615 (+)
G750533 LOC106569543 other downstream 1580110 78797142 ~ 78797548 (+)

Expression


Co-expression Network