G748945


Basic Information

Item Value
gene id G748945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77235407 ~ 77235632 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU850204
GATTGATAAAGTAACACTGGTAACATTCGGCAAGCgctaccggagtgccaagtctaggaccaaaaggcttcttagcagtttctttaatgcagggaaacttaaatccgttttaccaaatttctatcagcatgttaaatgtgcaaccagaggaaataGAACtgaaccacctttactccacacacagaggcttacaaagctttccctcgccctccatttggcaaatctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU850204 True 226 lncRNA 0.43 1 77235407 77235632

Neighbor

gene id symbol gene type direction distance location
LOC110530663 LOC105020301 coding upstream 24593 77181864 ~ 77210814 (+)
slc25a12 LOC106569494 coding upstream 79843 77127486 ~ 77155564 (+)
LOC118965635 NA coding upstream 146102 77087135 ~ 77090382 (+)
LOC110530659 LOC106569500 coding upstream 188960 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 514879 76526810 ~ 76720528 (+)
LOC110530673 NA coding downstream 76769 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 136555 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 149949 77385581 ~ 77386837 (+)
LOC110530677 LOC106569510 coding downstream 227171 77462803 ~ 77467237 (+)
LOC110530678 LOC106569511 coding downstream 242715 77478347 ~ 77541551 (+)
G748935 NA non-coding upstream 12541 77222357 ~ 77222866 (+)
G748933 NA non-coding upstream 14100 77221071 ~ 77221307 (+)
G748931 NA non-coding upstream 18375 77216516 ~ 77217032 (+)
G748930 NA non-coding upstream 19253 77215942 ~ 77216154 (+)
G748895 NA non-coding upstream 22947 77211182 ~ 77212460 (+)
G748946 NA non-coding downstream 677 77236309 ~ 77236586 (+)
G748951 NA non-coding downstream 10569 77246201 ~ 77264007 (+)
G748957 NA non-coding downstream 25548 77261180 ~ 77261800 (+)
G748964 NA non-coding downstream 37362 77272994 ~ 77273928 (+)
G749137 NA non-coding downstream 67105 77302737 ~ 77382611 (+)
G748917 NA other upstream 55279 77179344 ~ 77180128 (+)
G748905 NA other upstream 58058 77150663 ~ 77177349 (+)
G748432 NA other upstream 527763 76706730 ~ 76708278 (+)
LOC110530655 LOC106569480 other upstream 782970 76451222 ~ 76453376 (+)
G747987 cah12 other upstream 841078 76239950 ~ 76394329 (+)
G748959 LOC106569508 other downstream 31020 77266652 ~ 77272660 (+)
LOC110530993 LOC106569518 other downstream 648605 77863590 ~ 77887401 (+)
G749663 tcf3 other downstream 1008578 78244210 ~ 78245615 (+)
G750533 LOC106569543 other downstream 1561510 78797142 ~ 78797548 (+)

Expression


Co-expression Network