G748946


Basic Information

Item Value
gene id G748946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77236309 ~ 77236586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU850205
accaggatgtgtactgtgaGCACAAGcttaccaactggcaagtgtcttcactggcattttcaacctctccctgtccgagtctgtaataccaacatgttttaagaagaccaccatagtccatgtgcccaagaacactaaggtaacctgcctaaatgactaccaacccgtagcactcacgtctgtagccatgaaatgctttgaaaggctggtcatggctcacatcaacaacatcatcccaacagatccacagatgatgcaatctctattgcactccacac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU850205 True 278 lncRNA 0.46 1 77236309 77236586

Neighbor

gene id symbol gene type direction distance location
LOC110530663 LOC105020301 coding upstream 25495 77181864 ~ 77210814 (+)
slc25a12 LOC106569494 coding upstream 80745 77127486 ~ 77155564 (+)
LOC118965635 NA coding upstream 147004 77087135 ~ 77090382 (+)
LOC110530659 LOC106569500 coding upstream 189862 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 515781 76526810 ~ 76720528 (+)
LOC110530673 NA coding downstream 75815 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 135601 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 148995 77385581 ~ 77386837 (+)
LOC110530677 LOC106569510 coding downstream 226217 77462803 ~ 77467237 (+)
LOC110530678 LOC106569511 coding downstream 241761 77478347 ~ 77541551 (+)
G748945 NA non-coding upstream 677 77235407 ~ 77235632 (+)
G748935 NA non-coding upstream 13443 77222357 ~ 77222866 (+)
G748933 NA non-coding upstream 15002 77221071 ~ 77221307 (+)
G748931 NA non-coding upstream 19277 77216516 ~ 77217032 (+)
G748930 NA non-coding upstream 20155 77215942 ~ 77216154 (+)
G748951 NA non-coding downstream 9615 77246201 ~ 77264007 (+)
G748957 NA non-coding downstream 24594 77261180 ~ 77261800 (+)
G748964 NA non-coding downstream 36408 77272994 ~ 77273928 (+)
G749137 NA non-coding downstream 66151 77302737 ~ 77382611 (+)
G748917 NA other upstream 56181 77179344 ~ 77180128 (+)
G748905 NA other upstream 58960 77150663 ~ 77177349 (+)
G748432 NA other upstream 528665 76706730 ~ 76708278 (+)
LOC110530655 LOC106569480 other upstream 783872 76451222 ~ 76453376 (+)
G747987 cah12 other upstream 841980 76239950 ~ 76394329 (+)
G748959 LOC106569508 other downstream 30066 77266652 ~ 77272660 (+)
LOC110530993 LOC106569518 other downstream 647651 77863590 ~ 77887401 (+)
G749663 tcf3 other downstream 1007624 78244210 ~ 78245615 (+)
G750533 LOC106569543 other downstream 1560556 78797142 ~ 78797548 (+)

Expression


Co-expression Network