XLOC_026445 (si:dkeyp-71f10.5)


Basic Information

Item Value
gene id XLOC_026445
gene name si:dkeyp-71f10.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 30998362 ~ 31019832 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051535
CAGGGCCGCTCACAGAAAACACATGGACGTCCAGCTAATAAATAAAGGCCAGCAGCCAGATTGACCAGTGGTGCTGCTTGACTCTCACTTCACCTGTTTGCTGCCACTAAaactgtctgtctgcctgtctgccaAGATGCTGGCCCGTGCACTCCTGCAGACCTCTCTGGTCCTGTGGCTGGTACAGAGCACCATACAGGGAGGAGTTAGGCCACAGACTGGAGCTCTTGGAAGATTGGCAAGTCGAGGGCCTGGCATTGGTGCAAAAACTGGAGTGGCTGGAATTCTCGGAGCTCGTGGCTATGGAGCAGGCAAGGCAGGGAAAACAAGCGCGGGCCGTTACATTGGAGGAGCAGCATACAGACCCACTGCCGTCAGAGGAGGCCTGAAACAAGGATATGGGACGCTGGGTTACGGAGGGGCTGCAAACCTTGGTGCTGGCCTTGGCGCTGGTCTTGGGACAGGACTTGGGACTGGTCTTGGGCCAGCTGGACTTGGACTGGGAGCAGCGTATGGTTTAGGCAATGGGCTGGGAGCAGCTCTGGGTTATCCCGGAGGAAAACTTGGAGCTAGAGGTTACACTGGTAATGGCTATGGAGCTCAGCTAGGTTATGGTGCTGGTGGATACCCTGGCGTTGGACGCGGATATGGTGTACCAGCTGGCACATTCACAGGGCAAAGCTCAAAACCAGCAAAACTGGGTGTTGGGCCTAGAGGTGACCAGCCCATGTCACAGGGACAGGCAGGGTATGGGCTTGGTGCTGCCGGATATCTTGGAACTGGGTATACTGATGGTTATGGAGCAGGTCTCGGGGCCGGCTTATATCCACAAGGAGTTCGAGCAGGAAAGCAGATCGCAGGCTACAGTAATGGATACGGCAGTGAGGTTTATGGCACAGCAGACGCTTATGGAGCAGGAGCTGCCTTCCC
>TCONS_00051536
TCACTTCACCTGTTTGCTGCCACTAAaactgtctgtctgcctgtctgccaAGATGCTGGCCCGTGCACTCCTGCAGACCTCTCTGGTCCTGTGGCTGGTACAGAGCACCATACAGGGAGGAGTTAGGCCACAGACTGGAGCTCTTGGAAGATTGGCAAGTCGAGGGCCTGGCATTGGTGCAAAAACTGGAGTGGCTGGAATTCTCGGAGCTCGTGGCTATGGAGCAGGCAAGGCAGGGAAAACAAGCGCGGGCCGTTACATTGGAGGAGCAGCATACAGACCCACTGCCGTCAGAGGAGGCCTGAAACAAGGATATGGGACGCTGGGTTACGGAGGGGCTGCAAACCTTGGTGCTGGCCTTGGCGCTGGTCTTGGGACAGGACTTGGGACTGGTCTTGGGCCAGCTGGACTTGGACTGGGAGCAGCGTATGGTTTAGGCAATGGGCTGGGAGCAGCTCTGGGTTATCCCGGAGGAAAACTTGGAGCTAGAGGTTACACTGGTAATGGCTATGGAGCTCAGCTAGGTTATGGTGCTGGTGGATACCCTGGCGTTGGACGCGGTGTTGGGCCTAGAGGTGACCAGCCCATGTCACAGGGACAGGCAGGGTATGGGCTTGGTGCTGCCGGATATCTTGGAACTGGGTATACTGATGGTTATGGAGCAGGTCTCGGGGCCGGCTTATATCCACAAGGAGTTCGAGCAGGAAAGCAGATCGCAGGCTACAGTAATGGATACGGCAGTGAGGTTTATGGCACAGCAGACGCTTATGGAGCAGGTG
>TCONS_00051537
tgtctgcctgtctgccaAGATGCTGGCCCGTGCACTCCTGCAGACCTCTCTGGTCCTGTGGCTGGTACAGAGCACCATACAGGGAGGAGTTAGGCCACAGACTGGAGCTCTTGGAAGATTGGCAAGTCGAGGGCCTGGCATTGGTGCAAAAACTGGAGTGGCTGGAATTCTCGGAGCTCGTGGCTATGGAGCAGGCAAGGCAGGGAAAACAAGCGCGGGCCGTTACATTGGAGGAGCAGCATACAGACCCACTGCCGTCAGAGGAGGCCTGAAACAAGGATATGGGACGCTGGGTTACGGAGGGGCTGCAAACCTTGGTGCTGGCCTTGGCGCTGGTCTTGGGACAGGACTTGGGACTGGTCTTGGGCCAGCTGGACTTGGACTGGGAGCAGCGTATGGTTTAGGCAATGGGCTGGGAGCAGCTCTGGGTTATCCCGGAGGAAAACTTGGAGCTAGAGGTTACACTGGTAATGGCTATGGAGCTCAGCTAGGTTATGGTGCTGGTGGATACCCTGGCGTTGGACGCGGGTATGGGCTTGGTGCTGCCGGATATCTTGGAACTGGGTATACTGATGGTTATGGAGCAGGTCTCGGGGCCGGCTTATATCCACAAGGAGTTCGAGCAGGAAAGCAGATCGCAGGCTACAGTAATGGATACGGCAGTGAGGTTTATGGCACAGCAGACGCTTATGGAGCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000091783

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051535 False 930 mRNA 0.56 15 30998362 31019832
TCONS_00051536 False 779 mRNA 0.57 13 30998481 31019748
TCONS_00051537 True 698 mRNA 0.57 12 30998484 31019715

Neighbor

gene id symbol gene type direction distance location
XLOC_026444 paqr4a coding downstream 35716 30947964 ~ 30962646 (-)
XLOC_026443 coro1a coding downstream 57000 30926364 ~ 30941362 (-)
XLOC_026442 kmt5c coding downstream 88875 30868326 ~ 30909487 (-)
XLOC_026440 shank1 coding downstream 137185 30714111 ~ 30861177 (-)
XLOC_026441 BX682556.2 coding downstream 197704 30800541 ~ 30800658 (-)
XLOC_026446 NA coding upstream 22120 31041952 ~ 31058290 (-)
XLOC_026447 armc5 coding upstream 22753 31042585 ~ 31057624 (-)
XLOC_026448 elob coding upstream 43374 31063206 ~ 31079246 (-)
XLOC_026449 zgc:153292 coding upstream 60848 31080680 ~ 31086770 (-)
XLOC_026450 NA coding upstream 73380 31093212 ~ 31093764 (-)
XLOC_026439 NA non-coding downstream 302072 30694877 ~ 30696290 (-)
XLOC_026432 NA non-coding downstream 796531 30199036 ~ 30201831 (-)
XLOC_026427 NA non-coding downstream 959213 30036697 ~ 30039149 (-)
XLOC_026426 NA non-coding downstream 974877 30019836 ~ 30023485 (-)
XLOC_026453 NA non-coding upstream 154301 31174133 ~ 31177209 (-)
XLOC_026457 NA non-coding upstream 491638 31511470 ~ 31600282 (-)
XLOC_026460 NA non-coding upstream 630421 31650253 ~ 31650711 (-)

Expression


Co-expression Network