G750492 (LOC106569543)



Basic Information


Item Value
gene id G750492
gene name LOC106569543
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 78699830 ~ 78715194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU852025
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacaacacagacacacacaaaccaaatATATGGCTTCTAAACTTGGAATCAAGGCAGTTGAATAAATGGCATTTTCTTCTATATTTCTTTTTTAGTTGATACAGACACAACCAAACTTTGTGTTTAAGCTCAACTTTGGTTTGGAGTAATTACAATGAAGATATTACCTttccgtatttttttttttaaaactattttaacTATTTACACATCGATGTAAGATCGACCAGCGGTCTAAAACACTACCTTCACTACTATTTTAAACAATATGAAGagcaatgtatttattttgctacAACAGCGTTTACAGAAAAAAGGACACCTAAAAACACATTCTGAAAGCGTAAAATGTCATCATTGTCATTTGATTCAAGTCCCTGATTTTGCGTTTTTAAGTCCAGCTCCTGCTAGATTGCATTGTATGGATTCTACACAGTATGCAACAGTTACATTAATGATGTTGTTTCTCAATATCTTTACAATAAAGACAGCAATATAGGTGTTTGGAAGCAGAGTGTAAGGGGTGATACTAAGACTACAGGTGCTGGCATAGTAGAATAGTCCAGTCCCACCTTTGTTAAACTAGTGTAATTGTTTCGACTCTCCAAGTCACACGAGCCAAAGAGTTCCTCTTTCCTCTTTGTTGACTCCGACCGACACACAGGACATTCAGGTAGAATGACTGACGGTGTGGCCCCATATGAAGCCAGCCAGGTCAGTAAGGAAGCCGACCAGTCAGGTCATCCAGACAGAGATAAACAGACGTTTAGATTCACCCATGTGAAGAAGGCCTCTCTCCTGCAGCTCTCATAGGGTCACAAGTTGGAAGACAGCCGGTTCCGGGCTGAGTCTAACTCCGGTATGCTAACGATCGAATCCTTCTTAGGAGCTCCAGGGGCCGGGAGCCCCGACCCAGCCGCCGCTGCAGCCGCCCCCATCCCGGGTGCTCCTCCTGGGGGAGGAGTGGAGGCGAAGGCCACCCGCTGTGGAACTCCCGCGGGTCTCCCCCCAACCTGGACCCCAACCCCAGAGGGCCCAGGCTGGCTGGGGTGAGTGGGCTGAGGGGGGccgatggaggtggaggaggcatGGGTGGATGGTTGGGTAGATTGGGGAGGGCTGGGGCCGGCAGGAGGGGTTCCAtcctgagggagggagagctgggaGGCGGAGAGGACACGGGCATCTTGGCTAAGGGTGCCTGAGTGGAGCGAGTGGGTGCTTTTGTGTGAGGAGGGCCTCTGGATGGTGTGCGTGGGGCTGGGAACGTGGTGCTGCACCAGGGACAGCTGAGACCCAGACGGCCCCGCTCCCCCCATGTACTGGAATGTCCGTCCTGGATGCGCCAGAGGGCTCTGGACTGGTGGGCTGGAAATAGCCGACCCAAACACTCCTGTTGCATGAGCCATCTGTGGTGGCTGGGACTGGAGAGGAGATGCGGAAACAGGGCTCTGTGACAGGCTATGGACCACCTGGAACCTCCGCAACATACGGGGGGACTGCAGcgtccctgaccctgacccagacGCTGACCCTGGCCCTATCGGACCtgg

Function


NR:

description
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU852025 True 1665 lncRNA 0.51 2 78699830 78715194
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110530703 LOC106569538 coding upstream 65752 78626521 ~ 78636077 (+)
plekhj1 plekhj1 coding upstream 89585 78607413 ~ 78610245 (+)
LOC110530701 LOC106569539 coding upstream 102063 78592298 ~ 78597767 (+)
onecut3b onecut3 coding upstream 338359 78335901 ~ 78361471 (+)
LOC110530995 LOC106569526 coding upstream 511781 78072559 ~ 78188049 (+)
LOC110530704 LOC106569544 coding downstream 100926 78816120 ~ 78824322 (+)
LOC110530706 LOC106569546 coding downstream 115491 78830685 ~ 78861909 (+)
LOC110530707 LOC106569548 coding downstream 179397 78894591 ~ 78902977 (+)
LOC110530709 LOC106569551 coding downstream 223986 78939180 ~ 78952258 (+)
LOC110531004 LOC106569564 coding downstream 241041 78956235 ~ 78959026 (+)
G750474 NA non-coding upstream 35523 78664078 ~ 78664307 (+)
G750463 NA non-coding upstream 54155 78645112 ~ 78645675 (+)
G750426 NA non-coding upstream 116031 78583586 ~ 78583799 (+)
G750399 NA non-coding upstream 142207 78557346 ~ 78557623 (+)
G750491 LOC106569543 non-coding downstream 75 78715269 ~ 78715534 (+)
G750497 NA non-coding downstream 1331 78716525 ~ 78716813 (+)
G750498 LOC106569543 non-coding downstream 1799 78716993 ~ 78717213 (+)
G750501 NA non-coding downstream 8513 78723707 ~ 78723909 (+)
G750503 NA non-coding downstream 14300 78729494 ~ 78729724 (+)
G749663 tcf3 other upstream 454215 78244210 ~ 78245615 (+)
LOC110530993 LOC106569518 other upstream 812474 77863590 ~ 77887401 (+)
G749137 NA other upstream 1317219 77302737 ~ 77382611 (+)
G748959 LOC106569508 other upstream 1427170 77266652 ~ 77272660 (+)
G748917 NA other upstream 1519702 77179344 ~ 77180128 (+)
G750533 LOC106569543 other downstream 81948 78797142 ~ 78797548 (+)
G750854 NA other downstream 264036 78979230 ~ 78979981 (+)
G750935 NA other downstream 480076 79195270 ~ 79197378 (+)
ncana LOC106569686 other downstream 630243 79210727 ~ 79347454 (+)
LOC110530726 LOC106600567 other downstream 833303 79548127 ~ 79579010 (+)

Expression


G750492(LOC106569543) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.3.
End of interactive chart.

G750492(LOC106569543) Expression in each Bioproject

Bar chart with 8 bars.
G750492(LOC106569543) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network