XLOC_026453


Basic Information

Item Value
gene id XLOC_026453
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 31174133 ~ 31177209 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053053
ttcattgcgatcccaaggttcactgcggttttccacaaggtaagtaaaaagtaaacaaataaacacgatttgttgataaagcatgttctgtaaactagcgacgttatctaattacatcaagttcatttattaaaaacatatttttctcacatataacgttggtcatgcattagaacaatatatacattttaagataaggaacagtgtaaccagattgttgttttccacaatagaattcgtgcaaaatctatatataatatgcaatatgcaactctaataatacaaatgtattcgtaattgtttcaatattaaagaacatcaagtgtttccaaaggtttattgtaaaaacaattattttccatgcctttaaaggaaaaaggcagaaattttgcccgtctgagcacattttattcattgtacaacacaaaactaaacaaaaaaatagcttaatctaccacacacacacacacacacacacacacacatatatatatatatacaggtgtacattataaggtgttcactgttcagatatgaatattttttctttgctcttttcaggttctttagatttctttaaaaatccaattttgttttctaataagcaaaaagtaaaatcactttacccatgtttatatgttaaattgcacttgtctctctctctatctctgttaacacatttatatttgtttgattaattcttGTGTCTTTCAGCCTGTTTCTGCCTATCACCATTCCTCAATACTCAGATTTATCATCAAGATCTCAATTATAAGCTCAAGTTTTGATGACAACTTGGTGATCTGCAGAAAGCACCACCATGTAAGGAAGGCCAAGACCACTCTGGAATCAGTCAAGGGTTAGTGAAGTTTTTCATTccatgtatattaaatatctacattgtttaggcatatgtgattgtatgagataaaatgcatttattctttcactactattgtaataacagaaagaaacgcattagttttactattactattgtttatgacaaacattaaaaaactacagcataagctcacaaaatattgtggcctaactgtttaaaactaattgttctgggtgttgatagtggccaaccatttttttttctttttcagaaagtattttgttttgtctgattttatgacaccttataggccatcaactgcccacattggggtttaggaaattagaactgcttatgctgcttgtctactagtcttaggataagttagaaatgttataaatgtacattttttgttgtttttatctggtaCAGCTCATAGGAACTCCAATCTTCCCAACTGTGAGGGAGCCTTGCTCCAGTGACTGTCAGTGTGTACTTCATTGTTTCCATTAGTCCCTGAATCTGTAGACCCAGGTAACAGTGGGCTAGAgtcaaattttgtttttatttaaactaaggcatactgatggcctttttatctcagatttggtcatgcaagtataaatatattctaaagtatttttatattctttccattggtggaaaagatgttggtataattatttttaatggactgctaagatctcagcagacatttttctgagaTATTCTTGAGTGGGAGTCTGTGCAATACAAGGTGGATAGTATTTGCAAGGAAGAGCCCTTCATCTGTTCTGCTTCCACACTAGATATACTGCCAATTTAAGTAGATATGAACCATAAGCATAATCATTTCAAGAATGCACGaggtactttaaactgtatgtgttgaaactaaattaacaagaaaacagcTCTGTGACGTTCACCTAAGAAAATTAgattagaagatataaactgTTATGCACTTGTTCTGTACTGTTTCATTCCTTTTTCAAACACTGGCATTTTTGAAGGTTTATTTACAGCTAAGGATTAAGGATTGACAGGAAGATTTGTGGACTACATCAACTAATGACACTACCTCCAAAGAGTTGCAAAAAGCTGTCCAAAGTTTCAGCACCATCTTTAAGCCCATGATTTTAGTGTGTTTCATGCCTAATCACATGAGTTTATATCTGAGATAGATGAACTATGTGATTGTCTTAAACTGATCTACAAGTAAATGCCAAAACTTattggtttacttatttatttatttatttgtttgtttgtttgtttgtttgtttgtatatgttaacCAGGTGAAATGGAGTGAGGCATACCAGGATATGCCTGGTTTTACTTTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGCTTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTCGCTGACCTGTTGATATCAGAAGGTAACAATATCCAGTTGAATTTGTTTTAGTTGTTCAGTAACCTATTTAAATAGTATTGTGATTTTTTGATTGCTTATCATTGTAGACCGCAACAGCTCTGCAAAGCAAGTTGCAAAACAGAATCCATGAAACTGGCAGTGACTGGAAACCAGTTGGAAGACTTTGGTCTGTGATGTAGAGGAGTGGGCAGAGGGTGAggaaattcttattaatattacatgtagtcatgaaaaattgtgttactattactgtcattttttttcagtagcagaagcAAAGACAACAAAAAGAAGAAGTGATGTGGATGTCTTCGTCATATTGCATGGTATGTACACTAGACTTCTGTCAGTGTTGATTCTTTAAAAGTTGACGTATAATCCTTGTTATACAActttcttttcataaatatatttcagactctgctgacccagcaacaaagaggagggtgttcaacatcatcctgctagtcaggattcttcaggagaagcagtggattcttgtggcagagatggtcaaccactataaatacctttcAACTCATCCTGGTTCTTTCAAAGAACTTTCCTGCTTGTTTGCTACTGAAATGTActggtatgtatttgtattttttggcacagacataagcataaggttacccagtccaaaggatattaatatatttttatgttgttgtgttcttcttttaagattcgacatgtggccttaacgaagaggggttaaaaggtctatggatcatcattctca

Function

GO:

id name namespace
GO:0060842 arterial endothelial cell differentiation biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053053 True 3077 lncRNA 0.34 1 31174133 31177209

Neighbor

gene id symbol gene type direction distance location
XLOC_026452 smg1 coding downstream 15696 31118026 ~ 31158437 (-)
XLOC_026451 arl6ip1 coding downstream 58137 31104891 ~ 31115996 (-)
XLOC_026450 NA coding downstream 80369 31093212 ~ 31093764 (-)
XLOC_026449 zgc:153292 coding downstream 87363 31080680 ~ 31086770 (-)
XLOC_026448 elob coding downstream 94887 31063206 ~ 31079246 (-)
XLOC_026454 syt17 coding upstream 24333 31201542 ~ 31226841 (-)
XLOC_026455 apnl coding upstream 72676 31249885 ~ 31254979 (-)
XLOC_026456 LO017965.1 coding upstream 79963 31257172 ~ 31258459 (-)
XLOC_026457 NA coding upstream 334261 31511470 ~ 31600282 (-)
XLOC_026458 moto coding upstream 429572 31606781 ~ 31619463 (-)
XLOC_026446 NA non-coding downstream 115843 31041952 ~ 31058290 (-)
XLOC_026441 BX682556.2 non-coding downstream 373475 30800541 ~ 30800658 (-)
XLOC_026439 NA non-coding downstream 477843 30694877 ~ 30696290 (-)
XLOC_026432 NA non-coding downstream 972302 30199036 ~ 30201831 (-)
XLOC_026460 NA non-coding upstream 473044 31650253 ~ 31650711 (-)
XLOC_026469 NA non-coding upstream 758488 31935697 ~ 31957366 (-)
XLOC_026474 NA non-coding upstream 1008690 32185899 ~ 32222085 (-)
XLOC_026477 NA non-coding upstream 1147925 32325134 ~ 32337695 (-)

Expression


Co-expression Network