G750533 (LOC106569543)


Basic Information

Item Value
gene id G750533
gene name LOC106569543
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 78797142 ~ 78797548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU852066
ATGTAGCGGATGAGCCGGGACAGCCTCAGCAGCCTCAGCAGGCTCAGGATCTTAGTGAAGCGTACGATCCTCAGGGCCCTGGCCGTCTTATACATCTCAGAGTCGATCCCCTTCTCCACGATCAGGAAGATATAATCCACGGGGATGGAGGAGACAAAGTCCACGATGAACCAGGTCTTCAGGTACGTCTTCTTGATGGTCTTGGGGTCCAGGATGATGTCAGAGTTGTCCTCGATGATGATGCCAGTGCGGAAGTTGAGGACCAGGTCCATGAGGAAGAAGGTGTCGGAGATGACGTTGAAGATGATCCAGGGGGTGGTCGTCCCATCGTTGAAGAAGGTGATGCCCACCGGGATGACAATCAGGTTACCCACCATGAAAAGAAGCATCGTGAAATCCCAGTAgaa

Function

NR:

description
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU852066 True 407 TUCP 0.53 1 78797142 78797548

Neighbor

gene id symbol gene type direction distance location
LOC110530703 LOC106569538 coding upstream 163064 78626521 ~ 78636077 (+)
plekhj1 plekhj1 coding upstream 186897 78607413 ~ 78610245 (+)
LOC110530701 LOC106569539 coding upstream 199375 78592298 ~ 78597767 (+)
onecut3b onecut3 coding upstream 435671 78335901 ~ 78361471 (+)
LOC110530995 LOC106569526 coding upstream 609093 78072559 ~ 78188049 (+)
LOC110530704 LOC106569544 coding downstream 18572 78816120 ~ 78824322 (+)
LOC110530706 LOC106569546 coding downstream 33137 78830685 ~ 78861909 (+)
LOC110530707 LOC106569548 coding downstream 97043 78894591 ~ 78902977 (+)
LOC110530709 LOC106569551 coding downstream 141632 78939180 ~ 78952258 (+)
LOC110531004 LOC106569564 coding downstream 158687 78956235 ~ 78959026 (+)
G750525 NA non-coding upstream 11224 78785677 ~ 78785918 (+)
G750523 NA non-coding upstream 16126 78780765 ~ 78781016 (+)
G750521 NA non-coding upstream 18109 78778787 ~ 78779033 (+)
G750516 NA non-coding upstream 28197 78768644 ~ 78768945 (+)
G750510 NA non-coding upstream 48966 78747971 ~ 78748176 (+)
G750731 NA non-coding downstream 75418 78872966 ~ 78873344 (+)
G750741 NA non-coding downstream 95305 78892853 ~ 78893122 (+)
G750759 NA non-coding downstream 125746 78923294 ~ 78923524 (+)
G750770 NA non-coding downstream 134714 78932262 ~ 78932476 (+)
G750840 NA non-coding downstream 165798 78963346 ~ 78963575 (+)
G749663 tcf3 other upstream 551527 78244210 ~ 78245615 (+)
LOC110530993 LOC106569518 other upstream 909786 77863590 ~ 77887401 (+)
G749137 NA other upstream 1414531 77302737 ~ 77382611 (+)
G748959 LOC106569508 other upstream 1524482 77266652 ~ 77272660 (+)
G748917 NA other upstream 1617014 77179344 ~ 77180128 (+)
G750854 NA other downstream 181682 78979230 ~ 78979981 (+)
G750935 NA other downstream 397722 79195270 ~ 79197378 (+)
ncana LOC106569686 other downstream 547889 79210727 ~ 79347454 (+)
LOC110530726 LOC106600567 other downstream 750949 79548127 ~ 79579010 (+)
G752357 NA other downstream 1833762 80631310 ~ 80634052 (+)

Expression


Co-expression Network