XLOC_026460



Basic Information


Item Value
gene id XLOC_026460
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 31650253 ~ 31650711 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053054
GGAGGCTTCTGGGCTCACTCGTGGTAAGTCATCATTCTGTAATTCATAATTAATATAGATTATTAATCACTTTACTCCTGCATTTCTGATAGAAGTTACTGCTTTTAGATCATTGAATTAGGTCCAGATTTAAAGGACAGGAGTCATATATTTGATCAGTTTCATACCAGACAATCCAAGTAAATCTCcttgcttttttctgtttttcaggaCTCGATCTGACTCAGTTTGAAGTCGGAGACCTGATTGGAGAAGGAGCTTTTGGCCAGGTGTATGTGGCATCTCACAAACGCAGTAAAAGAGTAAAGGTAaagaactacttttttaaaattcaatCAACATTTTCCTCctgattaataaatataaataatttgttggctttaatttaatttgttgttgtttttccgcAGGTTGCCCTGAAGTGCATGGTGAAGAGTCAACAGGACCGTTATCTGGACG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053054 True 459 lncRNA 0.37 1 31650253 31650711

Neighbor


gene id symbol gene type direction distance location
XLOC_026458 moto coding downstream 30790 31606781 ~ 31619463 (-)
XLOC_026457 NA coding downstream 49971 31511470 ~ 31600282 (-)
XLOC_026456 LO017965.1 coding downstream 391794 31257172 ~ 31258459 (-)
XLOC_026455 apnl coding downstream 395274 31249885 ~ 31254979 (-)
XLOC_026454 syt17 coding downstream 423412 31201542 ~ 31226841 (-)
XLOC_026461 ccdc47 coding upstream 54743 31705454 ~ 31716157 (-)
XLOC_026462 kcnh6a coding upstream 78160 31728871 ~ 31784082 (-)
XLOC_026463 gfap coding upstream 141730 31792441 ~ 31804481 (-)
XLOC_026464 map3k3 coding upstream 164473 31815184 ~ 31845816 (-)
XLOC_026465 limd2 coding upstream 200140 31850851 ~ 31875138 (-)
XLOC_026453 NA non-coding downstream 473044 31174133 ~ 31177209 (-)
XLOC_026450 NA non-coding downstream 556489 31093212 ~ 31093764 (-)
XLOC_026446 NA non-coding downstream 591963 31041952 ~ 31058290 (-)
XLOC_026441 BX682556.2 non-coding downstream 849595 30800541 ~ 30800658 (-)
XLOC_026469 NA non-coding upstream 284986 31935697 ~ 31957366 (-)
XLOC_026474 NA non-coding upstream 535188 32185899 ~ 32222085 (-)
XLOC_026477 NA non-coding upstream 674423 32325134 ~ 32337695 (-)
XLOC_026481 NA non-coding upstream 914483 32565194 ~ 32572052 (-)
XLOC_026483 NA non-coding upstream 947933 32598644 ~ 32603191 (-)

Expression



Co-expression Network