G751011


Basic Information

Item Value
gene id G751011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 79368254 ~ 79375494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU852660
gtcaGATCGAggaaaagacaaacacacacacactctcttgctGCACGCGCTAACCACACATACACTCCTATATCTAAGGGCAGAGCACCCAGACGCTGTGGCACCATGTTGCACCCCATCATGATAGGCATCGTGACCTTCAACACCTCCTTGACCATCATCTACTGGACCTTTCTCCTGGGAGGGACCTTCTTTGACATGATGTCTCAAGAAGAAGACAAGCCCAAGAAGCTTAGTGAGGTCACCCCCGCTTGAGCCTGCGCCGCCATGGAACCCACTACCTACCTGTGAATTTACTATGACAACCACCGACAGCTTACTAGGCCTATAGGCAGCTTGTGTCGCATTACACattttatgttttgttttttgttttttcagAATTCCATTGggaatcctgtttttgctttctctTTCTGCCGTTTTCCACTTGTTCCACATCCGTAGAGAACCGGGTCATCTGGATCAATCTGGAATCATTCTaaaacagattGGGTTCTTGGCCCAAAACCCTCTGATGTGGATGCTGAGGGCGgtatggaggaagaagaggaggagcgaGGGATCCTATATGATGGAAGGATTAAGAAAGAGTGGATGGAGGAGAACGAGGTTGGGTTGCTGCCAGGGTTCTACCACGTGGCAGGGAACTACCACCCGCCTGCCCTGCCACTTCGCAGCGTTATCACAGCTTTGCCAAGTGAGATGATTATGTCCAATCAGAATGTGACCTTTCAGCGCCCTTTGACCCCTCATGTCACCTCCTTCGGAGTTCTGTAACCTCATTTGTTATGCCAATACGAAATCACCCCCTCATCTCTAGCCCTATGGAAAGTGTTTATATCTGAGAGGATTTTAAGATACAAGCCATATGGCTGAAATTTCATCTGGCCTATGAGAGGACAAAATCATCTGCTTGTAACTAACCAATACATTAAGATCTAGGCAGAAGAGTTCAATCTGGAATAGGGCAGTGTTTTTTGGCCTACATGCCAGGTTCAGTAACGAAGTCCATCCTTCATTTTTACCCCATAACAACTCCTCTGTTTGTTGCAAATGACATAGAGATAGATGCTTGAGCTACATAACCACCGAGGTACAACACATGTAGCTTCTATGAAATATAACTGTGATACATGTATGAATACATTAGTATGTTCTTGTATTGATGCTGATAGAAAGGTGGGCCATATTTATACTCATTGACATGAGAAATGGGTAAAAAAAACTATAGAGCTCTTGGATGTGATGTATAGCAGCTATATTACTTCatgtgtagacacacacacacacacacacacgcacatacgcgcacacacgcgtacacacgcgcacacacgcacacacttatatacacacacatatacacacacacaggttccagGTTTATGTGTTAGCAACAGTGTTTTCCCATTACGTAATAACTTGTGTTACTGTAATGTGTTTTTGAAATAAACATACTTTTACATTCCTGTTATGA
>TU852661
gtcaGATCGAggaaaagacaaacacacacacactctcttgctGCACGCGCTAACCACACATACACTCCTATATCTAAGGGCAGAGCACCCAGACGCTGTGGCACCATGTTGCACCCCATCATGATAGGCATCGTGACCTTCAACACCTCCTTGACCATCATCTACTGGACCTTTCTCCTGGGAGGGACCTTCTTTGACATGATGTCTCAAGAAGAAGACAAGCCCAAGAAGCTTAGTGAGGTCACCCCCGCTTGAGCCTGCGCCGCCATGGAACCCACTACCTACCTGTGAATTTACTATGACAACCACCGACAGCTTACTAGGCCTATAGGCAGCTTGTGTCGCATTACACattttatgttttgttttttgttttttcagAATTCCATTGggaatcctgtttttgctttctctTTCTGCCGTTTTCCACTTGTTCCACATCCGTAGAGAACCGGGTCATCTGGATCAATCTGGAATCATTCTaaaacagattGGGTTCTTGGCCCAAAACCCTCTGATGTGGATGCTGAGGGCGgtatggaggaagaagaggaggagcgaGGGATCCTATATGATGGAAGGATTAAGAAAGAGTGGATGGAGGAGAACGAGGTTGGGTTGCTGCCAGGGTTCTACCACGTGGCAGGGAACTACCACCCGCCTGCCCTGCCACTTCGCAGCGTTATCACAGCTTTGCCAAGTGAGATGATTATGTCCAATCAGAATGTGACCTTTCAGCGCCCTTTGACCCCTCATGTCACCTCCTTCGGAGTTCTGTAACCTCATTTGTTATGCCAATACGAAATCACCCCCTCATCTCTAGCCCTATGGAAAGTGTTTATATCTGAGAGGATTTTAAGATACAAGCCATATGGCTGAAATTTCATCTGGCCTATGAGAGGACAAAATCATCTGCTTGTAACTAACCAATACATTAAGATCTAGGCAGAAGAGTTCAATCTGGAATAGGGCAGTGTTTTTTGGCCTACATGCCAGGTTCAGTAACGAAGTCCATCCTTCATTTTTACCCCATAACAACTCCTCTGTTTGTTGCAAATGACATAGAGATAGATGCTTGAGCTACATAACCACCGAGGTACAACACATGTAGCTTCTATGAAATATAACTGTGATACATGTATGAATACATTAGTATGTTCTTGTATTGATGCTGATAGAAAGGTGGGCCATATTTATACTCATTGACATGAGAAATGGGTAAAAAAAACTATAGAGCTCTTGGATGTGATGTATAGCAGCTATATTACTTCatgtgtagacacacacacacacacacacacacgcacatacgcgcacacacgcgtacacacgcgcacacacgcacacacttatatacacacacatatacacacacacaggttccagGTTTATGTGTTAGCAACAGTGTTTTCCCATTACGTAATAACTTGTGTTACTGTAATGTGTTTTTGAAATAAACATACTTTTACATTCCTGTTATGA
>TU852662
gtcaGATCGAggaaaagacaaacacacacacactctcttgctGCACGCGCTAACCACACATACACTCCTATATCTAAGGGCAGAGCACCCAGACGCTGTGGCACCATGTTGCACCCCATCATGATAGGCATCGTGACCTTCAACACCTCCTTGACCATCATCTACTGGACCTTTCTCCTGGGAGGGACCTTCTTTGACATGATGTCTCAAGAAGAAGACAAGCCCAAGAAGCTTAGTGAGGTCACCCCCGCTTGAGCCTGCGCCGCCATGGAACCCACTACCTACCTGTGAATTTACTATGACAACCACCGACAGCTTACTAGGCCTATAGGCAGCTTGTGTCGCATTACACattttatgttttgttttttgttttttcagAATTCCATTGggaatcctgtttttgctttctctTTCTGCCGTTTTCCACTTGTTCCACATCCGTAGAGAACCGGGTCATCTGGATCAATCTGGAATCATTCTaaaacagattGGGTTCTTGGCCCAAAACCCTCTGATGTGGATGCTGAGGGCGgtatggaggaagaagaggaggagcgaGGGATCCTATATGATGGAAGGATTAAGAAAGAGTGGATGGAGGAGAACGAGGTTGGGTTGCTGCCAGGGTTCTACCACGTGGCAGGGAACTACCACCCGCCTGCCCTGCCACTTCGCAGCGTTATCACAGCTTTGCCAAGTGAGATGATTATGTCCAATCAGAATGTGACCTTTCAGCGCCCTTTGACCCCTCATGTCACCTCCTTCGGAGTTCTGTAACCTCATTTGTTATGCCAATACGAAATCACCCCCTCATCTCTAGCCCTATGGAAAGTGTTTATATCTGAGAGGATTTTAAGATACAAGCCATATGGCTGAAATTTCATCTGGCCTATGAGAGGACAAAATCATCTGCTTGTAACTAACCAATACATTAAGATCTAGGCAGAAGAGTTCAATCTGGAATAGGGCAGTGTTTTTTGGCCTACATGCCAGGTTCAGTAACGAAGTCCATCCTTCATTTTTACCCCATAACAACTCCTCTGTTTGTTGCAAATGACATAGAGATAGATGCTTGAGCTACATAACCACCGAGGTACAACACATGTAGCTTCTATGAAATATAACTGTGATACATGTATGAATACATTAGTATGTTCTTGTATTGATGCTGATAGAAAGGTGGGCCATATTTATACTCATTGACATGAGAAATGGGTAAAAAAAACTATAGAGCTCTTGGATGTGATGTATAGCAGCTATATTACTTCatgtgtagacacacacacacacacacacacacacgcacatacgcgcacacacgcgtacacacgcgcacacacgcacacacttatatacacacacatatacacacacacaggttccagGTTTATGTGTTAGCAACAGTGTTTTCCCATTACGTAATAACTTGTGTTACTGTAATGTGTTTTTGAAATAAACATACTTTTACATTCCTGTTATGA

Function

NR:

description
LOW QUALITY PROTEIN: myomegalin-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU852660 False 1480 lncRNA 0.44 3 79368254 79375494
TU852661 False 1482 lncRNA 0.44 3 79368254 79375494
TU852662 True 1484 lncRNA 0.44 3 79368254 79375494

Neighbor

gene id symbol gene type direction distance location
ncana LOC106569686 coding upstream 20800 79210727 ~ 79347454 (+)
slc25a42 LOC106569683 coding upstream 274998 79066751 ~ 79093256 (+)
armc6 armc6 coding upstream 302033 79060595 ~ 79066221 (+)
LOC110530711 LOC106569552 coding upstream 376110 78987215 ~ 78992144 (+)
LOC110531004 LOC106569564 coding upstream 409228 78956235 ~ 78959026 (+)
LOC110530721 LOC106600560 coding downstream 12102 79387596 ~ 79508009 (+)
LOC110530726 LOC106600567 coding downstream 172633 79548127 ~ 79579010 (+)
LOC110530727 LOC106569674 coding downstream 211846 79587340 ~ 79596019 (+)
LOC110530686 LOC106569672 coding downstream 313773 79689267 ~ 79713549 (+)
LOC110530734 LOC106569665 coding downstream 658130 80033624 ~ 80036953 (+)
G751008 NA non-coding upstream 16356 79350881 ~ 79351898 (+)
G751001 NA non-coding upstream 33521 79332926 ~ 79334733 (+)
G750957 NA non-coding upstream 122220 79237988 ~ 79246034 (+)
G750933 NA non-coding upstream 181255 79186173 ~ 79186999 (+)
G750923 NA non-coding upstream 197344 79168134 ~ 79170910 (+)
G751015 NA non-coding downstream 117 79375611 ~ 79376528 (+)
G751016 NA non-coding downstream 2604 79378098 ~ 79378341 (+)
G751030 NA non-coding downstream 26764 79402258 ~ 79404052 (+)
G750993 NA non-coding downstream 132891 79508385 ~ 79510833 (+)
G751078 NA non-coding downstream 140258 79515752 ~ 79519065 (+)
G750935 NA other upstream 170876 79195270 ~ 79197378 (+)
G750854 NA other upstream 388273 78979230 ~ 78979981 (+)
G750533 LOC106569543 other upstream 570706 78797142 ~ 78797548 (+)
G749663 tcf3 other upstream 1122639 78244210 ~ 78245615 (+)
G752357 NA other downstream 1255816 80631310 ~ 80634052 (+)
G752398 NA other downstream 1366110 80741604 ~ 80741945 (+)
G753205 LOC106569572 other downstream 2111326 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 2407855 81783282 ~ 81802285 (+)

Expression


Co-expression Network