G751127


Basic Information

Item Value
gene id G751127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 79714616 ~ 79716693 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU852791
CCATCTGTCGGCCCTGGAAGTATGCTTACATCTTATTCCTAAAGTTCTTGAATGATACATCTCAAACTTCAGACCTTTTAGTGCGTACTAACTACAGTCCTATGCATAGTAGTATATCCTATCAGATCACACTAGTTCAGTCAAGGGTCAGAGGCTTTTATTTACATACCACCGCAGAGAACACACTTCCATTTCTCTTAGTCACTTCTTAAAACAAGTTTTTATAAAAGCTAAATACAAGAACCACCATCTTATTTCATATCAACAGAAAATCATGACTAGACATACAATATAACAAATACATTATTAGTTTggacttattttaaaattgatgaACAAAGCCTAAAACTCAAGCCTGCATCTTGATAAGTGTCTGGTGCCAACATTAGATACAGAAACTAAACATGGCCCTCAATACAGGTTCATAAATGTGATGTCGAGCTTTTTCTAAGATTTCATTGTGCATAAGAATCCCTTTTAAATGGTCAAAGACTGCCATCTAGGTAACAACCAGTAACATTGCAGAACTAAGTAAAGCTATACAAGTGATTGTTGCTTACAACTTAACTGTACGCTGCTGCATCTGGCCAAGCCAAAAAGTAGATCTGTAATTCCCTTCCATGTCGATGTAAAACCAGTATTTTATTTTTCCATTTGTAAGCAAGCCAATGCAAGAAATAGCATATCTGCCCGAAGATAGCATTTTGCACTAAACACGACAACGTACAAGTCCCCCcccaaaagtatatatatttttttacaaagccAGATAGGTAAACTTGCACAGTAGCGTTAGACATCGGAAAGTTCCACATTAGGGGTATACTAGTAGTATTGACAACAGCTAATTGATCAACGCAACAGATTCAACTCGATAGTTGATATCCCACACTGATCACCTGATGTAATGAACCACACAGTCAGCAGTTTAGATCACAACATTGGTTTCTTCTCAAATAATAGCAGCATGGTAACAAGTTGTAACAAAACACACTGACTGTGCATTTTGTTTCTGGAATGATGTCACATAACTTTGACCCCGAAATGGAGAGGACCCACGTGGGTTTCTGTATTGATAAAGCTCTTGTGGAAACTGGATAACTCAAGGCACCATATGAAACAATGCACTATAGCAAAACATCTCCAGTTGGTGTACTTCCCCCATTGTATCCCACCCCCCAGACACACCTGTTGAACCACTAAGTACAGGATGCAGTTGCCAGAGTGAGAGTTGTTCCCAGAAGCAGTGATGTGAGGGGAGCCCAGCATGAAATCAAACCTTGATACAACCACTCGGACTTCACTCCAGAGGGATAAACCGTCCTGTTGGTTGCAACTGGTGAGGGAGTGTAGGGTGCATCCAGGTTGTGTATTATAGGTTATTCATGTCCACTGTGTGTGTACTAGGGGTTGGGTTGAGTGTGTGTCGGTACGgtcagcagaggaggagaggaaggacaggttgtgtgtgtgtactagggGTTTAGTTGagtgtgtgtccagagtgtgaCGGTACGGTcagcggaggaggagaggaaggacaggtcgtgtgtgtgtgtgttaggggttGTGTGTCCAGAGTGTGACGGTACGgtcagcagaggaggagaggaaggacaggttgtgtgtgtgttaggggttGTGTGTCCAGAGTGTGACGGTACGGTcagcggaggaggagaggaaggacaggTCGTGCGTGTGCCACCTGCACTGAATCACCTTGTCACCGTGCTCCCCTACCAGAGTCAGGGGCAACGGCTTCGTCAAGTCAC

Function

NR:

description
PREDICTED: WD repeat-containing protein 47 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU852791 True 1775 lncRNA 0.43 3 79714616 79716693

Neighbor

gene id symbol gene type direction distance location
LOC110530686 LOC106569672 coding upstream 1067 79689267 ~ 79713549 (+)
LOC110530727 LOC106569674 coding upstream 118597 79587340 ~ 79596019 (+)
LOC110530726 LOC106600567 coding upstream 135606 79548127 ~ 79579010 (+)
LOC110530721 LOC106600560 coding upstream 206607 79387596 ~ 79508009 (+)
ncana LOC106569686 coding upstream 367162 79210727 ~ 79347454 (+)
LOC110530734 LOC106569665 coding downstream 316931 80033624 ~ 80036953 (+)
LOC110530735 LOC106569664 coding downstream 354870 80071563 ~ 80074536 (+)
acsm3 acsm3 coding downstream 595832 80312525 ~ 80327493 (+)
map6d1 LOC106569659 coding downstream 611838 80328531 ~ 80339721 (+)
LOC110530801 LOC106600593 coding downstream 1181542 80898235 ~ 80924566 (+)
G751159 NA non-coding upstream 2428 79711565 ~ 79712188 (+)
G751145 NA non-coding upstream 47205 79666537 ~ 79667411 (+)
G751121 NA non-coding upstream 73746 79639679 ~ 79640870 (+)
G751122 NA non-coding upstream 74025 79639921 ~ 79640591 (+)
G751120 NA non-coding upstream 84067 79629988 ~ 79630549 (+)
G751165 NA non-coding downstream 6446 79723139 ~ 79723645 (+)
G751197 NA non-coding downstream 81285 79797978 ~ 79801420 (+)
G751202 NA non-coding downstream 91762 79808455 ~ 79810491 (+)
G751228 NA non-coding downstream 137155 79853848 ~ 79854862 (+)
G751247 NA non-coding downstream 163248 79879941 ~ 79891534 (+)
G750935 NA other upstream 517238 79195270 ~ 79197378 (+)
G750854 NA other upstream 734635 78979230 ~ 78979981 (+)
G750533 LOC106569543 other upstream 917068 78797142 ~ 78797548 (+)
G752357 NA other downstream 914617 80631310 ~ 80634052 (+)
G752398 NA other downstream 1024911 80741604 ~ 80741945 (+)
G753205 LOC106569572 other downstream 1770127 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 2066656 81783282 ~ 81802285 (+)
G753337 NA other downstream 2205469 81922162 ~ 81931491 (+)

Expression


Co-expression Network