G751202


Basic Information

Item Value
gene id G751202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 79808455 ~ 79810491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU852892
GAGATTACTGCTACCATAATGTAGGTCGATATTACAGTTTCCACAATGTAGGGGAGATTACAGCTACCATAATGTAGGTGAGATTACAACTACCATAATGTAGGGGAGATTAGGGTCCATAATGTAGGAGAGATTACAGCTACCATAATGTAGGAGAGATTACTGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGGGAGATTACACCTTCCATAATGTAGGAGAGATTACAGTTTCCATAATGTAGGTG
>TU852898
GAGATTACTGCTACCATAATGTAGGTCGATATTACAGTTTCCACAATGTAGGGGAGATTACAGCTACCATAATGTAGGTGAGATTACAACTACCATAATGTAGGGGAGATTAGGGTCCATAATGTAGGAGAGATTACAGCTACCATAATGTAGGAGAGATTACTGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGGGAGATTACACCTTCCATAATGTAGGGGAGATTACAGCTACCATAATGTAGGTGAGATTACACCTTCCATAATGTAGGTGAGATTACAGTTTCCATAATGTAGGAGAGATTACAGTTTCCATAATGTAGGTG
>TU852893
AGATTACAGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGGGAGATTACAGCTACCATAATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACACCTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACAGTTTCCATCATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAG
>TU852897
ATTACACCGTCCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGAGAGATTACAGCTACCATAATGTAGGAGAGATTACTGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGTGAGATTACACCTTCCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGGGAGATTACAGCTACCATAATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACACCTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGGGAGATTACACCTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGT
>TU852899
ATTACACCGTCCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGAGAGATTACAGCTACCATAATGTAGGAGAGATTACTGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGTGAGATTACACCTTCCATAATGTAGGTGAGATTACAGTTTCCATAAAGTAGGTGAGATTACAGCTACCATAATGTAGGTGAGATTACAGCTACCATAATGTAGGGGAGATTACAGCTACCATAATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACACCTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACAGTTTCCATCATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACAGCTTCCATAATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAGTTTCCATCATGTAGGTGAGATTACAGTTTCCATAATGTAGGTGAGATTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU852892 False 260 lncRNA 0.39 4 79808455 79809598
TU852898 False 338 lncRNA 0.39 4 79808455 79809598
TU852893 False 295 lncRNA 0.38 5 79808795 79810491
TU852897 False 383 lncRNA 0.39 3 79808927 79809489
TU852899 True 553 lncRNA 0.38 4 79808927 79810491

Neighbor

gene id symbol gene type direction distance location
LOC110530686 LOC106569672 coding upstream 94906 79689267 ~ 79713549 (+)
LOC110530727 LOC106569674 coding upstream 212436 79587340 ~ 79596019 (+)
LOC110530726 LOC106600567 coding upstream 229445 79548127 ~ 79579010 (+)
LOC110530721 LOC106600560 coding upstream 300446 79387596 ~ 79508009 (+)
ncana LOC106569686 coding upstream 461001 79210727 ~ 79347454 (+)
LOC110530734 LOC106569665 coding downstream 223133 80033624 ~ 80036953 (+)
LOC110530735 LOC106569664 coding downstream 261072 80071563 ~ 80074536 (+)
acsm3 acsm3 coding downstream 502034 80312525 ~ 80327493 (+)
map6d1 LOC106569659 coding downstream 518040 80328531 ~ 80339721 (+)
LOC110530801 LOC106600593 coding downstream 1087744 80898235 ~ 80924566 (+)
G751197 NA non-coding upstream 7035 79797978 ~ 79801420 (+)
G751165 NA non-coding upstream 84810 79723139 ~ 79723645 (+)
G751127 NA non-coding upstream 91762 79714616 ~ 79716693 (+)
G751159 NA non-coding upstream 96267 79711565 ~ 79712188 (+)
G751145 NA non-coding upstream 141044 79666537 ~ 79667411 (+)
G751228 NA non-coding downstream 43357 79853848 ~ 79854862 (+)
G751247 NA non-coding downstream 69450 79879941 ~ 79891534 (+)
G751250 NA non-coding downstream 86580 79897071 ~ 79898215 (+)
G751291 NA non-coding downstream 142907 79953398 ~ 79956217 (+)
G751316 NA non-coding downstream 203661 80014152 ~ 80015061 (+)
G750935 NA other upstream 611077 79195270 ~ 79197378 (+)
G750854 NA other upstream 828474 78979230 ~ 78979981 (+)
G750533 LOC106569543 other upstream 1010907 78797142 ~ 78797548 (+)
G752357 NA other downstream 820819 80631310 ~ 80634052 (+)
G752398 NA other downstream 931113 80741604 ~ 80741945 (+)
G753205 LOC106569572 other downstream 1676329 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 1972858 81783282 ~ 81802285 (+)
G753337 NA other downstream 2111671 81922162 ~ 81931491 (+)

Expression


Co-expression Network