G752239


Basic Information

Item Value
gene id G752239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 80513265 ~ 80529443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU854147
ATGCAGTGAAACctgagccctaggaccatgccccaggactacctgacatgatgactccttgatgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctagggtttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU854147 True 359 lncRNA 0.50 2 80513265 80529443

Neighbor

gene id symbol gene type direction distance location
map6d1 LOC106569659 coding upstream 173544 80328531 ~ 80339721 (+)
acsm3 acsm3 coding upstream 185772 80312525 ~ 80327493 (+)
LOC110530735 LOC106569664 coding upstream 438732 80071563 ~ 80074536 (+)
LOC110530734 LOC106569665 coding upstream 476312 80033624 ~ 80036953 (+)
LOC110530686 LOC106569672 coding upstream 799716 79689267 ~ 79713549 (+)
LOC110530801 LOC106600593 coding downstream 368792 80898235 ~ 80924566 (+)
LOC110530803 LOC106569635 coding downstream 408979 80938422 ~ 80965389 (+)
LOC110530752 LOC106569631 coding downstream 507658 81037101 ~ 81075897 (+)
LOC110530753 LOC106600601 coding downstream 547222 81076665 ~ 81189157 (+)
LOC110530754 NA coding downstream 666724 81196167 ~ 81200421 (+)
G752226 NA non-coding upstream 138736 80374307 ~ 80374529 (+)
G752223 NA non-coding upstream 146321 80366663 ~ 80366944 (+)
G752222 NA non-coding upstream 146926 80366116 ~ 80366339 (+)
G752220 NA non-coding upstream 150750 80362209 ~ 80362515 (+)
G752218 NA non-coding upstream 155557 80357506 ~ 80357708 (+)
G752329 NA non-coding downstream 45057 80574500 ~ 80581392 (+)
G752349 NA non-coding downstream 88343 80617786 ~ 80618008 (+)
G752354 NA non-coding downstream 98905 80628348 ~ 80628557 (+)
G752382 NA non-coding downstream 156009 80685452 ~ 80685764 (+)
G752402 NA non-coding downstream 216391 80745834 ~ 80746045 (+)
LOC110530726 LOC106600567 other upstream 943388 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 1165817 79210727 ~ 79347454 (+)
G750935 NA other upstream 1315887 79195270 ~ 79197378 (+)
G750854 NA other upstream 1533284 78979230 ~ 78979981 (+)
G750533 LOC106569543 other upstream 1715717 78797142 ~ 78797548 (+)
G752357 NA other downstream 101867 80631310 ~ 80634052 (+)
G752398 NA other downstream 212161 80741604 ~ 80741945 (+)
G753205 LOC106569572 other downstream 957377 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 1253906 81783282 ~ 81802285 (+)
G753337 NA other downstream 1392719 81922162 ~ 81931491 (+)

Expression


Co-expression Network