G752306 (pask)


Basic Information

Item Value
gene id G752306
gene name pask
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 80521240 ~ 80521817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU854222
CTTCCCCTGTAGCTCCGCATTCCCAAAGCCCAGGAGACTGAGGGACAGGTGGTTGTGGATGCTGTTGATAGAGCCATCAGGGTGGAGGGTGAGGAGACCACTGAGAGGGGCGAACACCCACACCGTCCCAGAATAGACCAGCCCCGAACCAGGGGAGAGGAGGCTGCTGTTCTCTTTAACTCCATTTTCACAATGTTCTGGCTGTGGTGCTCTGCAGATTGGGGAGGAGACGGGGGAACCCTGCTGGTCCTCAGGTCCACCAGGGGTGTTTTGGGGTTCTGGGCAGCCCAACCCATCCTTCAGCTGCTGGGGTTTACCACACACCACTGCCCCCTGGAGTTTAatacagaggaggagggaggtgccCCCCCTGCATCGACTGGACACCCTCTGGACCCTCAG

Function

symbol description
pask Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction; negative regulation of glycogen biosynthetic process; and protein phosphorylation. Predicted to be active in cytosol and nucleus. Orthologous to human PASK (PAS domain containing serine/threonine kinase).

NR:

description
PAS domain-containing serine/threonine-protein kinase isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU854222 True 402 lncRNA 0.59 2 80521240 80521817

Neighbor

gene id symbol gene type direction distance location
map6d1 LOC106569659 coding upstream 181519 80328531 ~ 80339721 (+)
acsm3 acsm3 coding upstream 193747 80312525 ~ 80327493 (+)
LOC110530735 LOC106569664 coding upstream 446707 80071563 ~ 80074536 (+)
LOC110530734 LOC106569665 coding upstream 484287 80033624 ~ 80036953 (+)
LOC110530686 LOC106569672 coding upstream 807691 79689267 ~ 79713549 (+)
LOC110530801 LOC106600593 coding downstream 376418 80898235 ~ 80924566 (+)
LOC110530803 LOC106569635 coding downstream 416605 80938422 ~ 80965389 (+)
LOC110530752 LOC106569631 coding downstream 515284 81037101 ~ 81075897 (+)
LOC110530753 LOC106600601 coding downstream 554848 81076665 ~ 81189157 (+)
LOC110530754 NA coding downstream 674350 81196167 ~ 81200421 (+)
G752226 NA non-coding upstream 146711 80374307 ~ 80374529 (+)
G752223 NA non-coding upstream 154296 80366663 ~ 80366944 (+)
G752222 NA non-coding upstream 154901 80366116 ~ 80366339 (+)
G752220 NA non-coding upstream 158725 80362209 ~ 80362515 (+)
G752218 NA non-coding upstream 163532 80357506 ~ 80357708 (+)
G752329 NA non-coding downstream 52683 80574500 ~ 80581392 (+)
G752349 NA non-coding downstream 95969 80617786 ~ 80618008 (+)
G752354 NA non-coding downstream 106531 80628348 ~ 80628557 (+)
G752382 NA non-coding downstream 163635 80685452 ~ 80685764 (+)
G752402 NA non-coding downstream 224017 80745834 ~ 80746045 (+)
LOC110530726 LOC106600567 other upstream 951363 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 1173792 79210727 ~ 79347454 (+)
G750935 NA other upstream 1323862 79195270 ~ 79197378 (+)
G750854 NA other upstream 1541259 78979230 ~ 78979981 (+)
G750533 LOC106569543 other upstream 1723692 78797142 ~ 78797548 (+)
G752357 NA other downstream 109493 80631310 ~ 80634052 (+)
G752398 NA other downstream 219787 80741604 ~ 80741945 (+)
G753205 LOC106569572 other downstream 965003 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 1261532 81783282 ~ 81802285 (+)
G753337 NA other downstream 1400345 81922162 ~ 81931491 (+)

Expression


Co-expression Network