G752598


Basic Information

Item Value
gene id G752598
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 80637854 ~ 80730101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU854557
CAACAGTATACATTTGGGGATATCATCAGATTTAATCGGAAGAAGGGTACCATACCATATAACCACTATGCTATTTATGTGGGCAACCATGATATCACAGGTAAAAAACCTGAACAGGATATTTTTCACTTCTCAGGTGAAATTACTGATCCAGGAAATGCAGATTGTGTGTTTGACAGTCTGGCGGATGTTACAAAAGACAGCACTCCTGTGGTACAAACAGAATGGGCTGTTGTACACTTGCCTAGAAGAACAGAGGCCGGCATGATTGAGCAAATTAAACGCTTTCACAATAATTGTAGAGGagaatacaatgtgatttttgctAATTGTGAGCATCTTGTGACATTCATTCAATTTGGTTCTCCAGTCTGCGAACAGAAAGATACCAGTACGTGCATCGAATATTTGGCAAAACAATTGTGCAAAGCTAGCTCAACCCTATTCACAAATAAGAGGGGGCGTGGCAGAAGAGGTCTTGGTCTCCTACAGGATGAAACCCGTGCCAACCAGGGTGCACCAGCTGCTTGAGTTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCTCAGATGttatctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgacGTGAGGtcttaataataataaaacatgaGCAAGAATTCTGTTTGCCGTCAATTAagagttacattttttaaaatatgttataACTCACTTATCAACATTCATCTCGTGTTAAGTGATGTATTGGTAATATGGTGTTTTACTGTAAGATGAGGACATGTTGGAGACATTACTGTTAGCAGCACATGGACATGATTATCACTGATGTAATAGTTGAATCCCAACACCAGATGGCAGACAATGTACAACCTAAAGACCTTTGGTCTCGTGCTCTCAAATTATATTCTGGACCTTCGTGCCAGTTTGACTGCATTTTTTCATTCTTGgcttctaatcagggactgatttatacctgggacaccaggtggatgcaattcattatcaggtagaacagaaaacctgCAGCAATCTGGACCTCCAGGGTAGTTTTGGATACCCCTGGTCTAGTGTATTACAGTGGAATATTTATAATAAAACTACATGA
>TU854559
CAACAGTATACATTTGGGGATATCATCAGATTTAATCGGAAGAAGGGTACCATACCATATAACCACTATGCTATTTATGTGGGCAACCATGATATCACAGGTAAAAAACCTGAACAGGATATTTTTCACTTCTCAGGTGAACTTACTGAGCCAAGAAATGCAGATTGTGTGTTTGACAGTCTGGCGGATGTTACAAAAGACAGCACTCCTGTGGTACAAACAGAATGGGATGGAATAGACTTGCCTAGAAGAACAGAGGCCGGCATGATTGAGCAAATTAAACGCTTTCACAATAATTGTAAAGGAGAATACAGTGTGATTTCTGCTAATTGTGAGCATCTTGTGACATTCATTCAATTTGCTTATCCAGTCTGCGAACAGAAAGATACCAGTACGTGCATCGAATATTTGGCAAAACAATTGTGCAAAGCTAGCTCAACCCTATTCACAAATAAGAGGGGGCGTGGCAGAAGAGGTCTTGGTCTCCTACAGGATGAAACCCGTGCCAACCAGGGTGCACCAGCTGCTTGAGTTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgacGTGAGGtcttaataataataaaacatgaGCAAGAATTCTGTTTGCCGTCAATTAagagttacattttttaaaatatgttataACTCACTTATCAACATTCATCTCGTGTTAAGTGATGTATTGGTAATATGGTGTTTTACTGTAAGATGAGGACATGTTGGAGACATTACTGTTAGCAGCACATGGACATGATTATCACTGATGTAATAGTTGAATCCCAACACCAGATGGCAGACAATGTACAACCTAAAGACCTTTGGTCTCGTGCTCTCAAATTATATTCTGGACCTTCGTGCCAGTTTGACTGCATTTTTTCATTCTTGgcttctaatcagggactgatttatacctgggacaccaggtggatgcaattcattatcaggtagaacagaaaacctgCAGCAATCTGGACCTCCAGGGTAGTTTTGGATACCCCTGGTCTAGTGTATTACAGTGGAATATTTATAATAAAACTACATGA
>TU854563
CAACAGTATACATTTGGGGATATCATCAGATTTAATCGGAAGAAGGGTACCATACCATATAACCACTATGCTATTTATGTGGGCAACCATGATATCACAGGTAAAAAACCTGAACAGGATATTTTTCACTTCTCAGGTGAAATTACTGATCCAGGAAATGCAGATTGTGTGTTTGACAGTCTGGCGGATGTTACAAAAGACAGCACTCCTGTGGTACAAACAGAATGGGCTGTTGTACACTTGCCTAGAAGAACAGAGGCCGGCATGATTGAGCAAATTAAACGCTTTCACAATAATTGTAGAGGagaatacaatgtgatttttgctAATTGTGAGCATCTTGTGACATTCATTCAATTTGGTTCTCCAGTCTGCGAACAGAAAGATACCAATGAGTTCATCGAATGTTTTGCCAAAATCTTGTGCAAAGCTAACTCACCCCTATTCACAAATAAGAGGGGGCGTGGCAGAAGAGGTCTTGGTCTCCTACAGGATGAAACCCGTGCCAACCAGGGTGCACCAGCTGCTTGAGTTCTAAACCTCtcagatgttctctctctctcttccatcttctCTGTCTCTGAATGAAGTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagTGAGGTCTAAACCTCtcagatgttctctctctcttccatcctctctgtctctgtatgaagtgaggtcttaataataataaaacatgaGCAAGaattctgtttGCCGTCAATTAagagttacattttttaaaatatgttat
>TU854558
TCAGAACATATTCAAAGCAGCTGATAATTATTTAAAGTGTTCCAATTGTTAAGGTCAGAGCAGTTGGAGGAAGTCTGAGGCTCCATTGTCACGGGTCTGGTCAGAACAGTATTTAAAAGGTCACCTCTCCCAGCTTCAGTAGGCTCTGACCATCACAGGAAAGACCCTTCACTGTCACCTCTCAACTCAACGTCCACTTGTCTTTCTCTCCGGAGCATTTCCCCTGGACTGCCATGATGATGAGAATGAAGCTGACCTTCCTTTTGGCCATCTTACTTTTTCAACTGACCATCTCTGTTAAAGGAGGGCAGAATCCTCCTTCTGCCCGCCGGAATTCTGCTCCTGCCAACCTGAATCATGCTCCTCCTGGCCGGTCACCTGATCCTGGCCGCCGGAATTCTGCTCCTGCTGCCCTGTCTAGCACCGGTTCGCAAAATCCTCCTTTTCCCCACCAGAAAACGAAACATTGTGCTGATCCTTGCCGGACACCTGCTCCTAGCCACCAGAATTCTACTCCTGCTGCCCCGTCTATCGCCGTTTCGG

Function

NR:

description
uncharacterized protein LOC110516601 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU854557 False 1248 lncRNA 0.41 3 80637854 80705562
TU854559 False 1188 lncRNA 0.41 4 80637854 80705562
TU854563 False 850 lncRNA 0.41 6 80685107 80705562
TU854558 True 543 TUCP 0.51 4 80718856 80730101
Loading

Neighbor

gene id symbol gene type direction distance location
kcnab1b LOC106600589 coding downstream 21891 80531597 ~ 80615963 (-)
LOC118965561 NA coding downstream 96918 80539456 ~ 80540936 (-)
pask pask coding downstream 112580 80506911 ~ 80525274 (-)
mterf4 mterf4 coding downstream 132177 80499477 ~ 80505677 (-)
LOC110530746 LOC106569648 coding downstream 141389 80495461 ~ 80496465 (-)
LOC110530750 LOC106569642 coding upstream 54953 80760515 ~ 80762724 (-)
LOC110530751 LOC106600594 coding upstream 65700 80771262 ~ 80873508 (-)
LOC118965562 NA coding upstream 220946 80926508 ~ 80938905 (-)
LOC110530802 LOC106569633 coding upstream 260671 80966233 ~ 80969248 (-)
LOC118965637 NA coding upstream 487511 81193073 ~ 81196197 (-)
G752603 NA non-coding downstream 10369 80627279 ~ 80627485 (-)
G752597 NA non-coding downstream 27025 80608946 ~ 80610829 (-)
G752559 NA non-coding downstream 31575 80595417 ~ 80606279 (-)
G752586 NA non-coding downstream 53940 80581794 ~ 80583914 (-)
G752557 NA non-coding downstream 56490 80574834 ~ 80581364 (-)
G752653 NA non-coding upstream 27295 80732857 ~ 80733140 (-)
G752666 NA non-coding upstream 45855 80751417 ~ 80751645 (-)
G752668 NA non-coding upstream 50915 80756477 ~ 80756692 (-)
G752682 NA non-coding upstream 97807 80803369 ~ 80807581 (-)
LOC110530730 LOC106569679 other downstream 708314 79928053 ~ 79929540 (-)
G751815 LOC106569680 other downstream 715493 79904880 ~ 79922361 (-)
G751667 LOC106569674 other downstream 1041835 79595142 ~ 79596019 (-)
G751668 NA other downstream 1056570 79578878 ~ 79581284 (-)
G751378 NA other downstream 1472334 79103724 ~ 79165520 (-)
G752598 NA other upstream 13294 80637854 ~ 80730101 (-)
G752751 NA other upstream 273885 80979447 ~ 80979766 (-)
G752979 NA other upstream 506156 81211718 ~ 81212318 (-)
LOC110531011 LOC106569569 other upstream 516948 81202427 ~ 81333398 (-)
G754068 NA other upstream 735642 81441204 ~ 81442099 (-)
LOC110516601 NA coding downstream 67135 80638417 ~ 80651721 (-)
G752606 NA non-coding downstream 35029 80631796 ~ 80683827 (-)
LOC110531012 LOC106569572 other upstream 759075 81448735 ~ 81556398 (-)

Expression

G752598 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 20.
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G752598 Expression in each Bioproject

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G752598 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network