G752736 (LOC106569633)


Basic Information

Item Value
gene id G752736
gene name LOC106569633
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 80966236 ~ 80968434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU854728
AGAAAACTGGCGCTAACGCTTTATTCATCTCCAACTCATCACACATTATTAAACACGTACAAAATGGTTTCAAAATGAGCATATATATATACCACATCAATAGAGAGAGTTGAGCGATTACGGAGCTTGCAGCGTTACAGGGTTGAAAGGCAGGACGGTGACGGTCTTACTCTCTAGCCTATATCAGGGAATTACATTTTCACAATGTTACAAGATTGGAAAGTCACAAACCCAGATGTTTACACAACACACTTTGCCTCCATGCCCAGCACACTGATATAATTCATATATGTTACTTCATGTATATACACATTTTATGTAAACCAGAGTACGTCCGGCAGACGGGTCATTTTGAGATAGTATAAACATGACTTATTAATATTTCAGTAGAGGATGTCGTGCGTGACCTCCGATCTTAGCTTTACATTCCAGCAAACGGTTTTCCGCCATGCTCCTTTTTCTCCTCTTTCTCGGACTCTGGCGTTGTTACCTCATCTTTCACCTGCGTCTCAGCGGACTCCACTACCTCCTCGTTAGCTACTGAATCTCTCTTTGTCAGCATGCCTGCTTTCTCACTGTCCGCTTGGTCAAAGTAATCTTTCATGGCTTGTTCGTATAGCTCATAAGGAAACTGTCCGTTCGCCTGTGATTGGGTGTCGCGTTTGCTGATCGTGCTAGGGTACTCCGTTAATATTTTGGCGGCCAGAAAGGTTGTTATCTCGTCTTCGTCCGCCTCGTCATCGTCATCGGCTTCTCTCCTAAAAGGCATCTTGTTGAGCTCCGACATAAATAAGTTTTCCCTTCGGCCGGACTGAGCTGGGATTTTTGGAGGAGGCGCTGGTGCTGCTGCTGAAACTCTCGCCGGGGCGGCTGGTGCTGAAACCCTGGCCGGGACAGAGACACTTTTGAGCGGCCTCCGACTCACAGGATAGTCGTTGCTGATGGTTTCCATTTCAATGATTTTCAAGAAGTCTTCCTCGTCCATGTCCTCAGGAGCGTTTTTGACTGGCAGTCTCCGGCTGTAGTATCTGATTTTCGGTTTGGTCCTGTAGCGGGAAGAGGCTTGCGGGTGACGTTCTAGTTTTCTGATTTCCTCGGTGATCAGCATATCGATGAGGTCCTCCGTAGCGCGCTTGGCACTGTCCCTATTCTCCTCGTCCTCGAACATCAGCGGGTACTTCTTGTGTGGCCTCGGGAAGCCACCGTAGGCAGGTGCGTTTACGGGGCTGCCTGTGTTCACCGATTGGTACCTGTGCGTGTGACGTTCGTTCCCCGACACCACGGGAACGGGTCTGAGGGGACTAGCGGGCTGCTCCTGGAGGGTCCTGAGCAAGGCTCTCACCAGCTGCTCAGCCGGGATGTCTTGCTGCCTCTGGGTCGGCGAGGGAGACTGCCTTTCAGGTGCACCTTCGTCCTGGAGAGAGGCGagctggaggaggatgtggaaCTTTTCGACCTCATCATAGTCTCTTgttggctcctctctctctctgcccccatcTGTCCGCTGCTTCAGGCTCTCGATGTACTCCAGGGCTTTGATCATGTCTGAGCTGGGCGGGTATGCAGCGGGTTGCCGGTCCTCGGACTCCCCGCCTCTGAGCCTGTGATGGCGGGGGAGGGACGCGCACGCATGGAGGAGGCAGGCGAGAACAACAGTTTTCCCCGTGGATAGCTTGGGGAGTGACA

Function

NR:

description
secretogranin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU854728 True 1689 lncRNA 0.52 2 80966236 80968434

Neighbor

gene id symbol gene type direction distance location
LOC110530803 LOC106569635 coding upstream 847 80938422 ~ 80965389 (+)
LOC110530801 LOC106600593 coding upstream 41670 80898235 ~ 80924566 (+)
map6d1 LOC106569659 coding upstream 626515 80328531 ~ 80339721 (+)
acsm3 acsm3 coding upstream 638743 80312525 ~ 80327493 (+)
LOC110530735 LOC106569664 coding upstream 891703 80071563 ~ 80074536 (+)
LOC110530752 LOC106569631 coding downstream 68667 81037101 ~ 81075897 (+)
LOC110530753 LOC106600601 coding downstream 108231 81076665 ~ 81189157 (+)
LOC110530754 NA coding downstream 227733 81196167 ~ 81200421 (+)
LOC118965638 NA coding downstream 388525 81356959 ~ 81365769 (+)
LOC110529142 NA coding downstream 448706 81417140 ~ 81418322 (+)
G752480 NA non-coding upstream 16987 80948687 ~ 80949249 (+)
G752473 NA non-coding upstream 23999 80914291 ~ 80942237 (+)
G752456 NA non-coding upstream 90552 80873305 ~ 80875684 (+)
G752407 NA non-coding upstream 107036 80767695 ~ 80859200 (+)
G752442 NA non-coding upstream 145223 80819597 ~ 80821013 (+)
G752738 NA non-coding downstream 2216 80970650 ~ 80970868 (+)
G752745 NA non-coding downstream 7388 80975822 ~ 80976084 (+)
G752757 NA non-coding downstream 20538 80988972 ~ 80989744 (+)
G752781 NA non-coding downstream 50642 81019076 ~ 81019292 (+)
G752398 NA other upstream 224291 80741604 ~ 80741945 (+)
G752357 NA other upstream 332184 80631310 ~ 80634052 (+)
LOC110530726 LOC106600567 other upstream 1396359 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 1618788 79210727 ~ 79347454 (+)
G750935 NA other upstream 1768858 79195270 ~ 79197378 (+)
G753205 LOC106569572 other downstream 518386 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 814915 81783282 ~ 81802285 (+)
G753337 NA other downstream 953728 81922162 ~ 81931491 (+)
G754927 NA other downstream 2287305 83255739 ~ 83257866 (+)
G755286 NA other downstream 2660938 83629372 ~ 83629738 (+)

Expression


Co-expression Network