G752808


Basic Information

Item Value
gene id G752808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 81101585 ~ 81102101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU854815
gcaagctagcagttagcagacTGGGGCAAGCAagttagcagttagcagaccggttTAGCAAGCAAGCTGTTTTGGGTTAGGGTTGCCTCTTCGTGcagtgacgtcgatagaccagtcgtggattagtagggttccaagttgctctaggtagctagcaggccgcggttagcagaatgggccttcaacggacgtcgcgcctgaggggcctTTTGGAATATTCAAGTTGTAGAGGATCGGCGGGTttccgtgccccgtaccggcagtagaaggggtccagatattgtagcccaggagtgggctTCGGCGGTAGCCCACGAGCCCTACCCgggctagcttcaggctaattggtgcttgctccgggatggaaatgctagccaggagtagtctcCCAAGATTgtgttgtgaagatccagataaAAGgttcagtttgcggtaggaatccggggttatggagagaagaagaaaaaagtatAAAGTACACCGTGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU854815 True 488 lncRNA 0.53 2 81101585 81102101

Neighbor

gene id symbol gene type direction distance location
LOC110530752 LOC106569631 coding upstream 25688 81037101 ~ 81075897 (+)
LOC110530803 LOC106569635 coding upstream 136196 80938422 ~ 80965389 (+)
LOC110530801 LOC106600593 coding upstream 177019 80898235 ~ 80924566 (+)
map6d1 LOC106569659 coding upstream 761864 80328531 ~ 80339721 (+)
acsm3 acsm3 coding upstream 774092 80312525 ~ 80327493 (+)
LOC110530754 NA coding downstream 94066 81196167 ~ 81200421 (+)
LOC118965638 NA coding downstream 254858 81356959 ~ 81365769 (+)
LOC110529142 NA coding downstream 315039 81417140 ~ 81418322 (+)
LOC110530755 LOC106569585 coding downstream 316271 81418372 ~ 81444081 (+)
LOC110530757 LOC106569574 coding downstream 519033 81621134 ~ 81632686 (+)
G752781 NA non-coding upstream 82293 81019076 ~ 81019292 (+)
G752757 NA non-coding upstream 111841 80988972 ~ 80989744 (+)
G752745 NA non-coding upstream 125501 80975822 ~ 80976084 (+)
G752738 NA non-coding upstream 130717 80970650 ~ 80970868 (+)
G752811 NA non-coding downstream 2376 81104477 ~ 81104781 (+)
G752814 NA non-coding downstream 7633 81109734 ~ 81109972 (+)
G752820 NA non-coding downstream 12290 81114391 ~ 81114830 (+)
G752837 NA non-coding downstream 36216 81138317 ~ 81138608 (+)
G752838 NA non-coding downstream 38066 81140167 ~ 81144383 (+)
G752398 NA other upstream 359640 80741604 ~ 80741945 (+)
G752357 NA other upstream 467533 80631310 ~ 80634052 (+)
LOC110530726 LOC106600567 other upstream 1531708 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 1754137 79210727 ~ 79347454 (+)
G750935 NA other upstream 1904207 79195270 ~ 79197378 (+)
G753205 LOC106569572 other downstream 384719 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 681248 81783282 ~ 81802285 (+)
G753337 NA other downstream 820061 81922162 ~ 81931491 (+)
G754927 NA other downstream 2153638 83255739 ~ 83257866 (+)
G755286 NA other downstream 2527271 83629372 ~ 83629738 (+)

Expression


Co-expression Network