Gene
RNA
| Item | Value |
|---|---|
| gene id | G752838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 81140167 ~ 81144383 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU854845 | False | 380 | lncRNA | 0.36 | 4 | 81140167 | 81144383 |
| TU854849 | True | 297 | lncRNA | 0.39 | 2 | 81141757 | 81143353 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530752 | LOC106569631 | coding | upstream | 64270 | 81037101 ~ 81075897 (+) |
| LOC110530803 | LOC106569635 | coding | upstream | 174778 | 80938422 ~ 80965389 (+) |
| LOC110530801 | LOC106600593 | coding | upstream | 215601 | 80898235 ~ 80924566 (+) |
| map6d1 | LOC106569659 | coding | upstream | 800446 | 80328531 ~ 80339721 (+) |
| acsm3 | acsm3 | coding | upstream | 812674 | 80312525 ~ 80327493 (+) |
| LOC110530754 | NA | coding | downstream | 51784 | 81196167 ~ 81200421 (+) |
| LOC118965638 | NA | coding | downstream | 212576 | 81356959 ~ 81365769 (+) |
| LOC110529142 | NA | coding | downstream | 272757 | 81417140 ~ 81418322 (+) |
| LOC110530755 | LOC106569585 | coding | downstream | 273989 | 81418372 ~ 81444081 (+) |
| LOC110530757 | LOC106569574 | coding | downstream | 476751 | 81621134 ~ 81632686 (+) |
| G752837 | NA | non-coding | upstream | 1559 | 81138317 ~ 81138608 (+) |
| G752820 | NA | non-coding | upstream | 25337 | 81114391 ~ 81114830 (+) |
| G752814 | NA | non-coding | upstream | 30195 | 81109734 ~ 81109972 (+) |
| G752811 | NA | non-coding | upstream | 35386 | 81104477 ~ 81104781 (+) |
| G752808 | NA | non-coding | upstream | 38066 | 81101585 ~ 81102101 (+) |
| G752844 | NA | non-coding | downstream | 17430 | 81161813 ~ 81166849 (+) |
| G752772 | NA | non-coding | downstream | 25746 | 81170129 ~ 81170407 (+) |
| G752980 | NA | non-coding | downstream | 68825 | 81213208 ~ 81214740 (+) |
| G752981 | NA | non-coding | downstream | 70587 | 81214970 ~ 81215730 (+) |
| G753005 | NA | non-coding | downstream | 133597 | 81277980 ~ 81279340 (+) |
| G752398 | NA | other | upstream | 398222 | 80741604 ~ 80741945 (+) |
| G752357 | NA | other | upstream | 506115 | 80631310 ~ 80634052 (+) |
| LOC110530726 | LOC106600567 | other | upstream | 1570290 | 79548127 ~ 79579010 (+) |
| ncana | LOC106569686 | other | upstream | 1792719 | 79210727 ~ 79347454 (+) |
| G750935 | NA | other | upstream | 1942789 | 79195270 ~ 79197378 (+) |
| G753205 | LOC106569572 | other | downstream | 342437 | 81486820 ~ 81487610 (+) |
| sdhc | LOC106569582 | other | downstream | 638966 | 81783282 ~ 81802285 (+) |
| G753337 | NA | other | downstream | 777779 | 81922162 ~ 81931491 (+) |
| G754927 | NA | other | downstream | 2111356 | 83255739 ~ 83257866 (+) |
| G755286 | NA | other | downstream | 2484989 | 83629372 ~ 83629738 (+) |
