XLOC_026476 (si:dkey-16p21.7)


Basic Information

Item Value
gene id XLOC_026476
gene name si:dkey-16p21.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 32294745 ~ 32320543 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051592
AGTAAGGAGCTGTCGGGGAGTCAGGCAGCTCAGTATGTCGGGCCCTACCGACTGGAAAAGACGCTGGGGAAGGGCCAGACAGGTCTGGTGAAGTTAGGAGTTCACTGTATCACAACACAGAAGGTGGCCATAAAGATAGTTAACAGAGAAAAGCTATCAGAGTCTGTTCTTATGAAAGTGGAGAGAGAGATAGCTATTCTTAAACTAATAGAACACCCTCATGTCCTAAAACTGTATGATGTGTACGAGAATAACAAATATCTGTATTTAGTGCTGGAACATGTATCTGGTGGGGAGTTATTCGACTACCTGGTTAAGAAAGGCAGATTGACCCCTAAAGAGGCACGAAAGTTCTTCAGACAAATCATATCTGCCTTGGATTTCTGTCATAGTCATTCTATATgTCACAGAGATCTTAAACCTGAAAACCTCCTTCTGGATGAGAAGAATAATATCAGGATCGCTGACTTTGGCATGGCCTCCCTACAGGTTGGGGACAGTCTGCTGGAGACCAGTTGCGGATCACCCCATTATGCATGTCCTGAGGTTATCAGGggAGAGAAATACGATGGACGTCGAGCAGATGTATGGAGTTGTGGGGTTATACTCTTTGCTCTGTTGGTGGGAGCGTTGCCCTTTGACCATGATAACCTGCGTCAGCTGCTGGAGAAAGTGAAGAGTGGAGTATTTCACATGCCTCACTTCATTCCTCCAGACTGCCAGGCTCTGCTTCGTGGCATGATTGAGGTCAACGCTGAGAAACGCCTCACGTTGGAAGAAATACAAAAGCACCCCTGGTATCAAGGGGGCAGGAATGAGCCGTGTCCAGAGCAGCCGCCACCGAGGCGTGTGTGTGTTAAGAGGATTCTGTCTCTCACAGATCTGGACCCCGATGTCCTAGAGAGCATGCATTCCCTGGGCTGCTTCAGAGACCGAGTCAAGCTGACCAGAGACCTGCAATGTGAAGAAGAAAACCAGGAGAAGCTGATCTACTACCTTCTGTTGGACAGAAAGGAGCGCTACCCTAGTTATGAAGATGAGCATCTTCCTCCCAGAAATGACGTTGATCCTCCCCGTAAGCGGGTGGACTCGCCCATGTTGACTCGTCATGGGCGCTGTCGGCCGGAGAGAAAGAGTCTGGAGGTACTGAGTGTGACAGAGCAGGGCTCTCCAACACCCCCCCGCAGAGCACTGGATACCTCTGCACACAGCCAGAGGTCTCGGTCTGTTAGTGGAGCATCAACTGGCCTCTCATCCAGCCCCCTCAGCAGCCCTCGAAGCCCAGTTTTCACTTTCAGCCAAACTGAAGTCACCTCTGCTTCCGCCACCCAGTCCAAAGACCCCAAAGCTGGAAGTTCCACCACACCCCGGGCGTCCCAGCGTGCGCCTGAGCAAAAAACCCAGACCCTGCCCACAAAAGCAGCTTCTGACCGCCCCCACCTACAGTCTATGAAGTCCCTCCCCCTGCAGACTCCCCCGTCCCCCTCGCCCTCCCCTTCTCCGCTCCTGTCCCCCATCCCTCGCTTCTTCTTCCCTGCTCCTTCTGTCCTGAAGTCTGTCACTAAGACCATCTATCCTAACTCTGCCCATGTGTCGCAGGTTACCCCGCAGGGCTCCCCACTCCCCACCCCTCTGGGGACCCCTGTGCACCACCCCCAGCACCCCCCTCCCACcccgccctcctcctcctcctcctcgtcctccTCGCGGGCTGaaggaggtggtggtggtggtgtgggtGGTGGTTCCCTGTCCCTCACCCCACCCTCTAGTCCTGGGGGAAGTGGTGGAATGGCTGCCAGTAGTTCAGCCCACTGGAGGACGCGCCTCAACTCCTTCAAGAACAACCTGCTGGGCTCGCCACGCTTCCACCGCCGGAGGCTACAGGTTCCTACGTCAGAAGACATGTCCAGTTTAACTCCAGAGTCCAGCCCAGAGTTGGCAAAGAAGTCGTGGTTCGGAAATTTCATCAGTCTGGAGAGGGAAGAGCAGATTTTTGTGGTGATAAGAGACAAACCTCTAAGCTCCATCAAGGCTGACATCGTCCATGCTTTTCTATCCATCCCCTCCCTGAGTCACAGTGTCATCTCTCAGACAAGTTTCCGGGCGGAGTACAAGTCCTCCGGAGGTCCGTCTGTCTTCCAGAAGCCAGTCAAATTTCAGGTTGACATCGCCTTCTCTGAGGGAGAAAGAGAACGTGAGAGGGACAAagacagagagagggagggaAGGAGGGAGACAGGCATCTACAGCGTCACCTTTACTCTATTATCAGGTCCTAGTCGCAGGTTTAAAAGAGTGGTAGAGACCATTCAAGCTCAGCTTCTCAGCACACATGACCAGCCGTCTGTGCAGGCACTGGCAGATGAGAAGAATGGGCTTTCGTCCCGTCCACCCAGCACACCGACCCGTCAGAACTCTCGTCGCTCGGAGGGCGGAGGTGATCGCGGGGAGCGGGCAGAGCGCGCCGATCGAGGAGAAGGGAGCAGTATTGGTGGTAGCGTGAGTGTACTACAAAGGAAGGGATCTGGCAAAGATAAAACTCGCCTCCTTTCCTCAAATGGGACCCAGTCTCAACCCTAAGTGAACTAATCAGACAAGCTGTAAAGGGGTTGACACGAGTCGCTCATGGTCCATCTGCACAACACACAACGACAGGTAAACTTAGCCCTGAATTTCACATCACACCCTGGGATCCAACTGTAACAAGTCAGGAGTCTGTCTACACGGAAGTGTTCTTACATGCAAGTCATCGtcagaagaaaaaattataatatcgCTTTTCCGATTCTAAGCATTTACAAACGTGAAATATACACCCCAGCAACAAATTATTCGGTTCACTACAAAGAAGGATCAATGCTCAAGTGATCTAATGGCAACAAACTAGACAAACCATGGGACAGAAAAGAATGTCTCTCAAacttatcatcatcatcttcatctccaTCATCGTCATTATAAGCAATGATCATCAGAAAAATCAGAATAAGCTGCTTAAGGTAGAGAAAAGCAAACAGAATGGCAAAAAGCAGGACCTTCTTCATTCTTAACACCACTTGGAGCACAAAAAAAGGatttctaaaacttttttttattattaaattttgtaTCACAAAATGCAATTATAGTCTTACATGACTATACCCTCATGATCTGAGGATGTGTGTTAAGTGTTGAAGATATAGCCTGTGTTGTTGTAGATCCTAAAAATTGGTCACTGAAAGATATGCAGTGGAAAGATGGCCACCGGAAGCTACACTTGGAGAATGTTGTCAAAACTGGGCTGTTGTAAGTCATGGCAGTTCTCAGACTATACCAGATCCACCCCACTCACTAAACAGGCACAGAGGCTTAGAGATTTCCTATGACATGTTCAAACACAGACCGAACAAGAGGAATGAAATAGCCTGTCGTGCTCTTGTGTCCTACaattagacaagaaaaaatatgcCTTCGCCATCTTAACCATCATTTGTTTTTCCATTTCTTGTTTagattatatttttgttatattctGAAATAACTTGTTTCCATTgagtaaatggaaaaaaagtgaatgtgaaaaaaaacaaaaatagaaatgttgaactatttattgatttaaaaacacgttatttatttatttatttatttatttatttatttatttatttatttatttatttatttgatggatTGTTTGCTAAATGTTCAGGCTGGTAAAATAAAAATCGCACAGGTTACAATTTAGAAAATCGTTTAAAAAAACGACCCATTTCTGTTTGTTCCCAAATATCTTCTAACAATGCTGCAAAAGTCCTCTAAAAGACATTTCAGTAGTTTCCTGtctcattttcatttcatatCACATAAAAACAGAAGCCAACTCACAAAGGAGAAAAACTGGAGAGTAATGAAAAATCAACCAAGCAATGACTCCATGCCTTGGATGTCTCCCACAGGGAGAACATTTTAAAGCCCTCCAGGATGCACGTAAACCTAAAGACTGAAGTGAACCTTATGGAAGACGAGGAACAAACGGGGAACGAGAATGAAGCCCTCCATGTTCGCTCTCCATCTTTGAGAATGTTACCCAGACAAAAGCCCAAAGTTTCGGACTCGTATGTACCAGGCCAGCCCCTCGTACGAAACGCGAGCAGTATTCTGTctttttcacacacatgcacacacacgcacacacacaagaagACTCAAAACTGACAAtatgaaacaaaatgaatgatAACTGGACTTTGAAACTGGAATGCACTGTCCTAAAAAGAGAATTGTATTCAAACAAATAGTTGTCCCTTTTCTCGCCCACCCACGGGAATGGGTGAAGTGCTCTCTTAAGTGCAGACTCAGGATCAGCAGGGCTTTTTACTGCATTACGGTTGTGAATGGAAGGAACCTGATCCTGAACATCCACTTAAAAGCTCTTTCTCCAATGAGTCTTGGCCCTGAAGCCCAGAATCTGACCGTAAAGCGCCCCCctgcctctctctctttcaccCTCCAGTCCACTCTTTTCCTGACGCAAAGAGCACTAAATGCAAAGCAAGGTTTTGCTCTGGTCCTCCCTCTGCCACCATCCTGCAGCCATCACGTTAAC
>TCONS_00051593
ATGTGTCCTTTGCACATTAGCAGCCATGAAACGATAACAATAATACATACTATATGTGTTTATgagtatttaataaatgtttatgtgtgtttgttagcATATATTTGCATCTGTGTTCACTTTTTTAGGTTGGCAAAGAAGTCGTGGTTCGGAAATTTCATCAGTCTGGAGAGGGAAGAGCAGATTTTTGTGGTGATAAGAGACAAACCTCTAAGCTCCATCAAGGCTGACATCGTCCATGCTTTTCTATCCATCCCCTCCCTGAGTCACAGTGTCATCTCTCAGACAAGTTTCCGGGCGGAGTACAAGTCCTCCGGAGGTCCGTCTGTCTTCCAGAAGCCAGTCAAATTTCAGGTTGACATCGCCTTCTCTGAGGGAGAAAGAGAACGTGAGAGGGACAAagacagagagagggagggaAGGAGGGAGACAGGCATCTACAGCGTCACCTTTACTCTATTATCAGGTCCTAGTCGCAGGTTTAAAAGAGTGGTAGAGACCATTCAAGCTCAGCTTCTCAGCACACATGACCAGCCGTCTGTGCAGGCACTGGCAGGTAAATGTTGAACACTACACTTACACTCAAACATGTACTCCTGCATGATAAGttaaacttaaagggatagtttacccaagaCTGAACATTCAGTCCTCAGTCACTTTACCcccttttttgttttaaacctCTCAGATTTTCAGTTTTATGTCGAACATAATAGAAgatatttgaagaaagctggaaaacggtaaccattgactttcaaagtatttggtttttctattatggaagttaatggttacaggtttttcttCCTTCAAGATATCGTCTttaatgtttaacagataaagaaactcaaaggtttggaacaagtgagggGTAAGTACAATttcattttgtggtgaactatccctttagaaaAAGCTTGTGCCAGTGCAAACCCTATTTGGCACTAAAAAACAAAGACATGCAGTGAAACATGCCAAACCATGACATTATTTTTGTGACTGACACTGTTGCATATGCATTTTTAGGTTTtgtgaaaaagtattttaatGAATCATGTTATGAGATTTGCTAAGGTTTGTGGTGGTTAGTTTACTGAAATTTGCCCATTTTATTAAATCACGCAAAATGATGCCTTAACCCATTTTGCTACTGTGTTAGAAGATTACTTGCATTTATTCACCACTGACCCAGCTTTTTTGTGACCTG
>TCONS_00051594
ATGTCCAGTAAGGAGCTGTCGGGGAGTCAGGCAGCTCAGTATGTCGGGCCCTACCGACTGGAAAAGACGCTGGGGAAGGGCCAGACAGGTCTGGTGAAGTTAGGAGTTCACTGTATCACAACACAGAAGGTGGCCATAAAGATAGTTAACAGAGAAAAGCTATCAGAGTCTGTTCTTATGAAAGTGGAGAGAGAGATAGCTATTCTTAAACTAATAGAACACCCTCATGTCCTAAAACTGTATGATGTGTACGAGAATAACAAATATCTGTATTTAGTGCTGGAACATGTATCTGGTGGGGAGTTATTCGACTACCTGGTTAAGAAAGGCAGATTGACCCCTAAAGAGGCACGAAAGTTCTTCAGACAAATCATATCTGCCTTGGATTTCTGTCATAGTCATTCTATATgTCACAGAGATCTTAAACCTGAAAACCTCCTTCTGGATGAGAAGAATAATATCAGGATCGCTGACTTTGGCATGGCCTCCCTACAGGTTGGGGACAGTCTGCTGGAGACCAGTTGCGGATCACCCCATTATGCATGTCCTGAGGTTATCAGGggAGAGAAATACGATGGACGTCGAGCAGATGTATGGAGTTGTGGGGTTATACTCTTTGCTCTGTTGGTGGGAGCGTTGCCCTTTGACCATGATAACCTGCGTCAGCTGCTGGAGAAAGTGAAGAGTGGAGTATTTCACATGCCTCACTTCATTCCTCCAGACTGCCAGGCTCTGCTTCGTGGCATGATTGAGGTCAACGCTGAGAAACGCCTCACGTTGGAAGAAATACAAAAGCACCCCTGGTATCAAGGGGGCAGGAATGAGCCGTGTCCAGAGCAGCCGCCACCGAGGCGTGTGTGTGTTAAGAGGATTCTGTCTCTCACAGATCTGGACCCCGATGTCCTAGAGAGCATGCATTCCCTGGGCTGCTTCAGAGACCGAGTCAAGCTGACCAGAGACCTGCAATGTGAAGAAGAAAACCAGGAGAAGCTGATCTACTACCTTCTGTTGGACAGAAAGGAGCGCTACCCTAGTTATGAAGATGAGCATCTTCCTCCCAGAAATGACGTTGATCCTCCCCGTAAGCGGGTGGACTCGCCCATGTTGACTCGTCATGGGCGCTGTCGGCCGGAGAGAAAGAGTCTGGAGGTACTGAGTGTGACAGAGCAGGGCTCTCCAACACCCCCCCGCAGAGCACTGGATACCTCTGCACACAGCCAGAGGTCTCGGTCTGTTAGTGGAGCATCAACTGGCCTCTCATCCAGCCCCCTCAGCAGCCCTCGAGTAAGTAACCCACATGTTTTTGACCATATCTATGTTGTATACAATGTAAAACACTACTATGTTGTGCTCAGTGAACAATGGTGA

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0042149 cellular response to glucose starvation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0030010 establishment of cell polarity biological_process
GO:0007409 axonogenesis biological_process
GO:0016310 phosphorylation biological_process
GO:0005813 centrosome cellular_component
GO:0005634 nucleus cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0050321 tau-protein kinase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131122-54 Predicted to enable protein serine/threonine kinase activity and tau-protein kinase activity. Predicted to be involved in several processes, including axonogenesis; cellular response to glucose starvation; and protein phosphorylation. Predicted to act upstream of or within phosphorylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in centrosome and cytoplasm.

Ensembl:

ensembl_id ENSDARG00000077545

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051592 False 4594 mRNA 0.47 19 32294745 32320537
TCONS_00051593 False 1213 mRNA 0.39 3 32298503 32299892
TCONS_00051594 True 1368 mRNA 0.49 13 32303581 32320543

Neighbor

gene id symbol gene type direction distance location
XLOC_026475 cpt1cb coding downstream 4649 32228901 ~ 32290096 (-)
XLOC_026474 NA coding downstream 72660 32185899 ~ 32222085 (-)
XLOC_026473 pih1d1 coding downstream 113912 32172534 ~ 32180833 (-)
XLOC_026472 tnnt1 coding downstream 123867 32157140 ~ 32170878 (-)
XLOC_026471 baxb coding downstream 214829 32074806 ~ 32079916 (-)
XLOC_026477 NA coding upstream 4591 32325134 ~ 32337695 (-)
XLOC_026478 prmt1 coding upstream 36290 32356833 ~ 32363021 (-)
XLOC_026479 si:ch211-195b15.7 coding upstream 138177 32458720 ~ 32472155 (-)
XLOC_026480 rcn3 coding upstream 215443 32535986 ~ 32541072 (-)
XLOC_026481 NA coding upstream 244651 32565194 ~ 32572052 (-)
XLOC_026469 NA non-coding downstream 337379 31935697 ~ 31957366 (-)
XLOC_026460 NA non-coding downstream 644034 31650253 ~ 31650711 (-)
XLOC_026457 NA non-coding downstream 694463 31511470 ~ 31600282 (-)
XLOC_026453 NA non-coding downstream 1117536 31174133 ~ 31177209 (-)
XLOC_026483 NA non-coding upstream 278101 32598644 ~ 32603191 (-)
XLOC_026499 NA non-coding upstream 979651 33300194 ~ 33304123 (-)
XLOC_026500 CABZ01012959.1 non-coding upstream 1023533 33344076 ~ 33345247 (-)

Expression


Co-expression Network