G753219


Basic Information

Item Value
gene id G753219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 81509291 ~ 81509533 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU855308
cttacatacagttgaaggcggaagtttacataaacttaggttgacgtcattaaaactcgtttttcaaccactccacaaatttcttgttagcaaactatagttttggcaagtcagttaggacattactttgtgcatgacacaagtaacttttccaacaattgtttacagacagattatttcactgtatcacaattccagtgggtcagaattttacatacactaacaggctgactacactaCTCG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU855308 True 243 lncRNA 0.36 1 81509291 81509533

Neighbor

gene id symbol gene type direction distance location
LOC110530755 LOC106569585 coding upstream 67563 81418372 ~ 81444081 (+)
LOC110529142 NA coding upstream 90969 81417140 ~ 81418322 (+)
LOC118965638 NA coding upstream 143522 81356959 ~ 81365769 (+)
LOC110530754 NA coding upstream 308870 81196167 ~ 81200421 (+)
LOC110530753 LOC106600601 coding upstream 320134 81076665 ~ 81189157 (+)
LOC110530757 LOC106569574 coding downstream 111601 81621134 ~ 81632686 (+)
dnaaf6 LOC106569578 coding downstream 123852 81633385 ~ 81636491 (+)
LOC110530761 LOC106569577 coding downstream 127136 81636669 ~ 81665274 (+)
lig1 lig1 coding downstream 157113 81666646 ~ 81692412 (+)
mpz myp0 coding downstream 201634 81711167 ~ 81743458 (+)
G753217 NA non-coding upstream 4288 81504749 ~ 81505003 (+)
G753216 NA non-coding upstream 4815 81504112 ~ 81504476 (+)
G753205 LOC106569572 non-coding upstream 21681 81486820 ~ 81487610 (+)
G753201 NA non-coding upstream 33724 81475273 ~ 81475567 (+)
G753193 NA non-coding upstream 46482 81461782 ~ 81462809 (+)
G753252 NA non-coding downstream 55225 81564758 ~ 81565004 (+)
G753256 NA non-coding downstream 68698 81578231 ~ 81578436 (+)
G753280 LOC106569576 non-coding downstream 108492 81618025 ~ 81619734 (+)
G753305 NA non-coding downstream 181413 81690946 ~ 81691368 (+)
G753319 NA non-coding downstream 204114 81713647 ~ 81715051 (+)
G752398 NA other upstream 767346 80741604 ~ 80741945 (+)
G752357 NA other upstream 875239 80631310 ~ 80634052 (+)
LOC110530726 LOC106600567 other upstream 1939414 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 2161843 79210727 ~ 79347454 (+)
sdhc LOC106569582 other downstream 273816 81783282 ~ 81802285 (+)
G753337 NA other downstream 412629 81922162 ~ 81931491 (+)
G754927 NA other downstream 1746206 83255739 ~ 83257866 (+)
G755286 NA other downstream 2119839 83629372 ~ 83629738 (+)
G755277 NA other downstream 2143512 83653045 ~ 83654438 (+)

Expression


Co-expression Network