G753319


Basic Information

Item Value
gene id G753319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 81713647 ~ 81715051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU855468
GATATTTATATTCTGTGGATAGTTTTTGTTATGCTGTGCTTTTTAGTTAGTATCAATCAACTCCAATCCTTGTTGCCTGCCATCATAACTCATGTTCATAGGGCATTGTGCCCTTGGATAAACATTGTGTCCTTGGATAAAcagtggttgtgtgtgtatggattTTGAAGTGTTTATAAATGGTTTTGAAACCGAAGAAAAAGGTTGAAAATAACATGTCTATTCCACTAGGTCTACTTGTCTTTTCAAAGTAAATTAAATGCTCCATCCACACCACACTAGTTTTGAAGGTTGTGTTGGTTTATTGACGTGAATACAAGGGGTTTGGAACGATAGACTCGACAATAGTCTGGAAGGATagtcttgaaaaaaaaaaacaccttgcAACTCAAAAACATTCTCTACTCCACTCAATCCCGTTGTCTCTGTCTTATTAcccagggacaaagttgtggcaTGTGCAGCTAAGATTTTTCTGATTTAATTAACCCTGCGTGCCCCAGTCCTCTTTATCCTCTTGTCTGTTTGTATAGTATTGTCCTTTTATATCCCcagaaaaatagttttgaaccGTGCAGTGCTGATCTTtcgtgttttatatttttttattgaaagCGCCATGAAAGTGAACAATGGTGAAACACACATAGATAGGATGCTACAATGGTGAAACACACATAGATAGGATGCTACAATGGTGAAACACACATAGATAGGATGCTACAATGGTGAAACACACATAGATAGAATGCTACAatggtgaaacacacacacatagatagcATGCTACAATGGtgaaacatacacacatagaTAGAATGCTACAATggtgaaacacacacatagatagaATGCTACAatggtgaaacacacacacatagatagcATGCTACAATGGtgaaacatacacacatagaTAGAATGCTACAATGGtgaaacatacacacatagaTAGAATGCTACAATGGTGAAACATACACACGTAGATAGAATGCTACAATGGtgaaacatacacacatagaTAGAATGCTACAatggtgaaacacacacacatagatagaaTGCTACAATGGTGAAACACACATAGATAGCATGCTACAATGGtgaaacatacacacatagaTAGCATGCTACAATGGtgaaacatacacacATAGATAGAATGTTACAatggtgaaacacacacacatagatggaATGCCACAATGGtgaaacatacacacatagaTAGAATGTTACAATGGtgaaacatacacacatagaTGCAATGCCACAATGGTGAAACACACATAGATAGAATGCTACAATGGtgaaacatacacacatagaTGGAATG

Function

NR:

description
uncharacterized protein LOC110014016, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU855468 True 1336 lncRNA 0.37 2 81713647 81715051

Neighbor

gene id symbol gene type direction distance location
lig1 lig1 coding upstream 21235 81666646 ~ 81692412 (+)
LOC110530761 LOC106569577 coding upstream 48373 81636669 ~ 81665274 (+)
dnaaf6 LOC106569578 coding upstream 77156 81633385 ~ 81636491 (+)
LOC110530757 LOC106569574 coding upstream 80961 81621134 ~ 81632686 (+)
LOC110530755 LOC106569585 coding upstream 271919 81418372 ~ 81444081 (+)
atp1a2a LOC100136182 coding downstream 31749 81746800 ~ 81779970 (+)
sdhc LOC106569582 coding downstream 68231 81783282 ~ 81802285 (+)
trnar-ucu-2 NA coding downstream 90497 81805548 ~ 81805621 (+)
LOC110511052 LOC106569583 coding downstream 93402 81808453 ~ 81922125 (+)
kirrel1b LOC106569584 coding downstream 231141 81946192 ~ 82034520 (+)
G753305 NA non-coding upstream 22279 81690946 ~ 81691368 (+)
G753280 LOC106569576 non-coding upstream 93913 81618025 ~ 81619734 (+)
G753256 NA non-coding upstream 135211 81578231 ~ 81578436 (+)
G753252 NA non-coding upstream 148643 81564758 ~ 81565004 (+)
G753219 NA non-coding upstream 204114 81509291 ~ 81509533 (+)
G753321 NA non-coding downstream 5380 81720431 ~ 81725384 (+)
G753322 NA non-coding downstream 11428 81726479 ~ 81730576 (+)
G753327 NA non-coding downstream 16724 81731775 ~ 81820622 (+)
G753353 NA non-coding downstream 80329 81795380 ~ 81795732 (+)
G753374 NA non-coding downstream 118237 81833288 ~ 81834194 (+)
G753205 LOC106569572 other upstream 226037 81486820 ~ 81487610 (+)
G752398 NA other upstream 971702 80741604 ~ 80741945 (+)
G752357 NA other upstream 1079595 80631310 ~ 80634052 (+)
LOC110530726 LOC106600567 other upstream 2143770 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 2366199 79210727 ~ 79347454 (+)
G753337 NA other downstream 207111 81922162 ~ 81931491 (+)
G754927 NA other downstream 1540688 83255739 ~ 83257866 (+)
G755286 NA other downstream 1914321 83629372 ~ 83629738 (+)
G755277 NA other downstream 1937994 83653045 ~ 83654438 (+)

Expression


Co-expression Network