G753327



Basic Information


Item Value
gene id G753327
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 81731775 ~ 81820622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU855479
CTCTAAtcaatctctacctctctatctgtctctacctctctctacctctctctacctctctatctgtctctacctctctctacctctctctacctctctacctgtctctacctctctctctacctctctacctgtctctacctctctctctacctctctacctgtctctacctctctctctacttctccacctgtctctaactctctacctctctacctgtctctatctctctacctgtctctacctctctacctgtctctacctctctacctgtctctatctcgctacctgtctctacctacctgtctctctacctctctacctgtctctatacccatctctaactgtctctctacctctctacctgtctctatacccatctctaactgtctctctacctctttacctgtctctatacccatctctaactgtctctctacctctctacctgtctctatacccatctctacatgtctctctacctctctacctgtctctctacctctctacctgtctctatacctctctacctgtctctatacccatctctaactgtctctctaccgctctacctgtctctatacccatctctacCCGTCTCTCTAccggtctctctacctgtctctctacctgtctctacctctctacctgtctcgctacctgtctctacctgtctctctacctatctctctacctctctacatgTCCCTATACCCATCTCTActtgtctctctacctctctacctgtctctacctctctacttctctctgcctgtctctctgtctgtcaatgAGTTGTGTTAGTATTCAGGCAGGGACTTAGCTCCTAAACCTCTCCCTAGTCACCTTCGGACTaatttctctgtctgtcagtgagcTGTGTTAGTATTCAGGCAGGGACTTAGCTCCTACACCCCTCCCTAGTCACCTTCTGACTGATTTATCTGGCTGCATCcgaaaatggcaccctgttccctatgggcactggtcaaaagtagtgcactatatagggaatagggtgctgttttgaGAGACAGCTCTGGTTCTGTATCTCTAACCTAGTTACGTCAGGCCAGGGTGACGTCCTGTTTGTTGACCGActctctgcgtcccaaatggcatgatgttccctatat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU855479 True 1137 lncRNA 0.48 4 81731775 81820622

Neighbor


gene id symbol gene type direction distance location
lig1 lig1 coding upstream 39363 81666646 ~ 81692412 (+)
LOC110530761 LOC106569577 coding upstream 66501 81636669 ~ 81665274 (+)
dnaaf6 LOC106569578 coding upstream 95284 81633385 ~ 81636491 (+)
LOC110530757 LOC106569574 coding upstream 99089 81621134 ~ 81632686 (+)
LOC110530755 LOC106569585 coding upstream 290047 81418372 ~ 81444081 (+)
kirrel1b LOC106569584 coding downstream 125570 81946192 ~ 82034520 (+)
LOC110530760 NA coding downstream 284478 82105100 ~ 82108513 (+)
LOC110530764 NA coding downstream 417094 82237716 ~ 82252379 (+)
LOC110530769 LOC106569594 coding downstream 492672 82313294 ~ 82320766 (+)
uck2b LOC106569706 coding downstream 520595 82341217 ~ 82358286 (+)
G753322 NA non-coding upstream 1199 81726479 ~ 81730576 (+)
G753321 NA non-coding upstream 6391 81720431 ~ 81725384 (+)
G753319 NA non-coding upstream 16724 81713647 ~ 81715051 (+)
G753305 NA non-coding upstream 40407 81690946 ~ 81691368 (+)
G753280 LOC106569576 non-coding upstream 112041 81618025 ~ 81619734 (+)
G753374 NA non-coding downstream 12666 81833288 ~ 81834194 (+)
G753372 NA non-coding downstream 63150 81883772 ~ 81884563 (+)
G753338 NA non-coding downstream 97790 81918412 ~ 81929038 (+)
G753337 NA non-coding downstream 101540 81922162 ~ 81931491 (+)
G753440 NA non-coding downstream 135246 81955868 ~ 81963152 (+)
G753205 LOC106569572 other upstream 244165 81486820 ~ 81487610 (+)
G752398 NA other upstream 989830 80741604 ~ 80741945 (+)
G752357 NA other upstream 1097723 80631310 ~ 80634052 (+)
LOC110530726 LOC106600567 other upstream 2161898 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 2384327 79210727 ~ 79347454 (+)
G754927 NA other downstream 1435117 83255739 ~ 83257866 (+)
G755286 NA other downstream 1808750 83629372 ~ 83629738 (+)
G755277 NA other downstream 1832423 83653045 ~ 83654438 (+)
G755298 NA other downstream 1837475 83658097 ~ 83660046 (+)

Expression



Co-expression Network