G753502 (LOC106569695)


Basic Information

Item Value
gene id G753502
gene name LOC106569695
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 82082317 ~ 82086287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU855704
gattagaggcagtagggatgaccagggatttcctcttgataaatgtgtgaatgGGACCatattcctgtcctgctaagcaatgaaaatgtaacaagtacttttgggtgtcagggaaaatgtatggagtaaattgttttcttcagtaatgtggtgaagtaaaagtaaaagttgtcaaaaaatataaatagtaaagtacagatacccaataAAATGACAGACATATCTAGATCTTCCTGAGTTATACAGTGTTGATTCAAAGTAGTCTACAGACATATCTAGATCTTCCTGAGTTATACAGTGTTGATTCAAAGTAGTCTACAGACATATCTAGATCTTCCTGAGTTATACAGTGTTGATTCAAAGTAATCTACAGACATATCTAGATCATCCTGAGTTATACAGTGTTGATTCAAAGTAGTCTACAGACATATCTAGATCTTCCTGTTATACAGTGTTGATTCAAAGTAGCCTACATACATATCTAGATCATCCTGAGTTATACAGTGTTGATTCAAAGTAGTCTACAGACATtcattcagctttgatctaactttcTTAAAGAAGCATGATTCTCCAGAGTAGCCTGTTCTCCTCTAGTATAATGTGATTCAGGGCCATGTGTTTTGTGACATGACCtggatttgaacctttatttaaagcTTTTTCATCAAACTCTCCTCCTTTATTTTTATGTCAGATCTAGAACCATCCTCAGACAATTACTTTCATTTTTGGTGAAATTATCATCTTGCTATGTCACATGATTGTGCAAAACACAGGGCCCTAATCAATACTTATGGAATTATGAATTCCATCCTCATTATGCcatcctcatcatcctcatcacattctttgttctgtgtgtttatttcatAGAGTCCAGCTCTGTGTTTGTGCTGAAGGGACAGGATGTTCGTCTGGATGTCCAGGAAAATGTTAAACTGAAAGAGTTAGAGTTTTTTAAGTGGACCTTCAGATCCGCCAATATCCTAAGATTCACTGACACATTGTCAGTGAGAGTGTCTCCTGGGTACAACAACAGGGTTGAGTTTTATAAGGGAAACTTCTCTCTGCTACTGAAGAACATACAGGAAGGAGACAGTGGACCGTATACTGCAGTAGTGAGTGGTGACAAAGAAAATACTATTATTGTACACCAGTTAGTTCTCCAAGAGAGAATTGAGCCTCCAGTCCTGACAGTGGACTCTAACTCCACCGTCAATGTCACCTGTAACGTGACTGTGGCCTGCAGAGGTCAGAACTCCTCTGTCACCTCCAGCTGTAACAGCAGCACCTGCTCTCaggtgggaggagagagtagaggggcTGAGACCTCCACTGTCCCCCTGCTCTCTGTCTATGTGGCAGGAAGTTTCATCATCTGTAACCACAGCAACCAAGTCAGCTGGGCCAACGACACCAAGGACATAGTGGAACTCTGTCCAATGAAAtctgTGTCTCCCCCTGCTGGTAGCATGTCTGTGTGCATGCTGAAGATCATCCTGATGTCTGTGGGGCTGGTCATCATGATCTCTGCTGTCATCACTGTCCACATCAGGGACAGATTCCACTATGGATAGAATCATGTGTATTGTCTTTTTAGACAACGTGATTCCTGCTCTGTGTCACTGTAAGATTAGGTCATAAaagtattttttacatttgtcagTTGCTACATAAGTTATCAAAACGTAATATAACATAACATGGCGTGAAATAATACAGCATAACATGACATAGCA

Function

NR:

description
PREDICTED: natural killer cell receptor 2B4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU855704 True 1742 lncRNA 0.40 3 82082317 82086287

Neighbor

gene id symbol gene type direction distance location
kirrel1b LOC106569584 coding upstream 47797 81946192 ~ 82034520 (+)
LOC110511052 LOC106569583 coding upstream 160192 81808453 ~ 81922125 (+)
trnar-ucu-2 NA coding upstream 276696 81805548 ~ 81805621 (+)
sdhc LOC106569582 coding upstream 280032 81783282 ~ 81802285 (+)
atp1a2a LOC100136182 coding upstream 302347 81746800 ~ 81779970 (+)
LOC110530760 NA coding downstream 18813 82105100 ~ 82108513 (+)
LOC110530764 NA coding downstream 151429 82237716 ~ 82252379 (+)
LOC110530769 LOC106569594 coding downstream 227007 82313294 ~ 82320766 (+)
uck2b LOC106569706 coding downstream 254930 82341217 ~ 82358286 (+)
czib cssa14h1orf123 coding downstream 272916 82359203 ~ 82361901 (+)
G753490 NA non-coding upstream 16923 82065032 ~ 82065394 (+)
G753474 NA non-coding upstream 55569 82026549 ~ 82026748 (+)
G753471 NA non-coding upstream 67688 82014429 ~ 82014629 (+)
G753470 NA non-coding upstream 70934 82011087 ~ 82011383 (+)
G753503 NA non-coding downstream 125214 82211501 ~ 82225706 (+)
G753563 NA non-coding downstream 149724 82236011 ~ 82237251 (+)
G753584 NA non-coding downstream 199813 82286100 ~ 82286542 (+)
G753585 NA non-coding downstream 200292 82286579 ~ 82286949 (+)
G753592 NA non-coding downstream 279537 82365824 ~ 82366453 (+)
G753337 NA other upstream 156158 81922162 ~ 81931491 (+)
G753205 LOC106569572 other upstream 594707 81486820 ~ 81487610 (+)
G752398 NA other upstream 1340372 80741604 ~ 80741945 (+)
G752357 NA other upstream 1448265 80631310 ~ 80634052 (+)
G754927 NA other downstream 1169452 83255739 ~ 83257866 (+)
G755286 NA other downstream 1543085 83629372 ~ 83629738 (+)
G755277 NA other downstream 1566758 83653045 ~ 83654438 (+)
G755298 NA other downstream 1571810 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 1699673 83785960 ~ 83788580 (+)

Expression


Co-expression Network