G753848 (LOC106569604)


Basic Information

Item Value
gene id G753848
gene name LOC106569604
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 82826254 ~ 82829732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU856122
TGTTGCACCACACTGCTTTATTTATCTAGAGCAGACAGTTTGATATCAACGGGCcaagctcctcctcctcctcctcctcctcctcctcctcttactgTGCATCTGATACGGAGAGGAAAGACCAAGTGCTGCTGGTCGATCACAAGTCCAAATGATTATTAGTATGATTTCTGGATTAGAAACAATAAACATAAAAGACAAACATGTAAACAGACCGGAAATACCTCATGAAACACAATGTCAACAACTATGTAGAAAAAAACCAtcaataatatatttatatatatatatatatttatattttctatACCCACTAAAATATACCAAAAGAAGCATCTATTGGTCATCTGaggaactctttttttttttttttgtaaaaatgtctccCCCCCTCAGATTTTTAAATATCCTTCAGCTGTAAATGTGAAAACTCAAAATGAGAAAATGAaacctaaataaataaaaaaaatataaccaAAGAAATATGTTAATTCTTTATGTGATGTTTGTAATACTGCAGAGTGTGAGGAGAGATGACAACAAGCTTCTCCAGTGGATCGATAAAGTTTGTTCGAAGATTCGAAAATGGATTTGACACATTCATCAATCCAAAAGTTAGCTAGTTCTCAAGTCTCAGAAAGTCTGTCGTTCCTTGACAACTTGAGAGTACAAAGAGTCAGAGACACAGCTCCATGACATTCGATGCaggtcacagacagacacagctccATGACATTCGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacagctccATGACATTCGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacacagctccaTGACATTCGATGCAGGTTACAGACAGAGATAAAAGGGCACTTTTACACTGAGCGACACCATGGGGGATCTCCATGGCCCAGGGAGACCTAGGGACCCAGCGAGGGCTGAGCTGCCCAGGGAGAGAGCCTCAGCTTGGGGAAGGGACAGTCTGGAAAGTCCTGGGGTTAGCAGCCTTCAGGTTGACCCAAAGTTTAATTATTTTCACAGTTGATTTCTACCTCCGCCACACATTCGTGGAAACTTGGCAATATAAAAAAAAGATTGAGGACAAGAGAGAAGCAGTAGAGAGGGAGGTTCGTCTTTCTTGAATACAAAAAGTGTACATGTGGTTGGTTGCATGTTCTCTCCTGGTTGACATTGGACAACATggctacatactgtagtgtaATGAGGGTGGCATCTTGACAACAGAGAGCAATAATGTCCTTGAGATGTGTACTTCCAGGAGGCCTCTGAACAAGTGAAAAAAGTAATCatctatacaaaacaacaaaactatATTCATATCAATTAATCTGTGTGAGAGAAAGACATGGGGATAATGTTCTGTTACGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGATCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACCTAGACCCTTACCCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTGGATAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTATGAGGGACTAGATAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCCTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCGAGGGTGGGCACTTCCAGTCCTCGTGGGCCTGATAGGTGTCAAagttttgccccagctaacacacctgactccaataatcaacgaatcatgatcttcagtttagaacgcaatttgattaatcagctgtgtttgatAGGATGGAGGTAAAAGAAAGACACCAATCAGAACCAATCAGAGGACTGGAGCTGCAAACCCCTGGACTAGACCCTTACCTCCATTTAATGTTCTGTTAGGAGGGACTAGACCGAGGGAGGGCTAGTGTCTGTTGTCCGTTAGTCTTTCCCCCGTTCATGTGTGTGTACGGGATGTGTTCCTCGTAGTTGTTTTGTCTCAACCCCAGTGACGAACCCGCCTCGTCCCGCTCAGAGCTGTGGTCCCTTCTCTGGGAGTAGGAGGAACTGTGGTCCCCTCTCTGGGAGTAAGATGAACTGTGGTCCCCTCTCTGGGAGTAAGAGGATGGGTCTAGGGGAATGCTCTCCATGTTGTCCATGTCCAGGTCAAAGTCCTCCTGCTCCGGAGGCTTGTTCTCCTGGCTATAGTAGAAGGAGACCTCCTGGAAGGACTGGTGAAGGTCCTTGTGGAGCATCTCAATGATCTCCTGGAAGCTGGGACGCAGCTTGGGGTTGTACTGCCAGCA
>TU856126
TGTTGCACCACACTGCTTTATTTATCTAGAGCAGACAGTTTGATATCAACGGGCcaagctcctcctcctcctcctcctcctcctcctcctcttactgTGCATCTGATACGGAGAGGAAAGACCAAGTGCTGCTGGTCGATCACAAGTCCAAATGATTATTAGTATGATTTCTGGATTAGAAACAATAAACATAAAAGACAAACATGTAAACAGACCGGAAATACCTCATGAAACACAATGTCAACAACTATGTAGAAAAAAACCAtcaataatatatttatatatatatatatatttatattttctatACCCACTAAAATATACCAAAAGAAGCATCTATTGGTCATCTGaggaactctttttttttttttttgtaaaaatgtctccCCCCCTCAGATTTTTAAATATCCTTCAGCTGTAAATGTGAAAACTCAAAATGAGAAAATGAaacctaaataaataaaaaaaatataaccaAAGAAATATGTTAATTCTTTATGTGATGTTTGTAATACTGCAGAGTGTGAGGAGAGATGACAACAAGCTTCTCCAGTGGATCGATAAAGTTTGTTCGAAGATTCGAAAATGGATTTGACACATTCATCAATCCAAAAGTTAGCTAGTTCTCAAGTCTCAGAAAGTCTGTCGTTCCTTGACAACTTGAGAGTACAAAGAGTCAGAGACACAGCTCCATGACATTCGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacacagctccaTGACATTCGATGCAGGTTACAGACAGAGATAAAAGGGCACTTTTACACTGAGCGACACCATGGGGGATCTCCATGGCCCAGGGAGACCTAGGGACCCAGCGAGGGCTGAGCTGCCCAGGGAGAGAGCCTCAGCTTGGGGAAGGGACAGTCTGGAAAGTCCTGGGGTTAGCAGCCTTCAGGTTGACCCAAAGTTTAATTATTTTCACAGTTGATTTCTACCTCCGCCACACATTCGTGGAAACTTGGCAATATAAAAAAAAGATTGAGGACAAGAGAGAAGCAGTAGAGAGGGAGGTTCGTCTTTCTTGAATACAAAAAGTGTACATGTGGTTGGTTGCATGTTCTCTCCTGGTTGACATTGGACAACATggctacatactgtagtgtaATGAGGGTGGCATCTTGACAACAGAGAGCAATAATGTCCTTGAGATGTGTACTTCCAGGAGGCCTCTGAACAAGTGAAAAAAGTAATCatctatacaaaacaacaaaactatATTCATATCAATTAATCTGTGTGAGAGAAAGACATGGGGATAATGTTCTGTTACGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGATCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACCTAGACCCTTACCCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTGGATAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTATGAGGGACTAGATAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCCTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCGAGGGTGGGCACTTCCAGTCCTCGTGGGCCTGATAGGTGTCAAagttttgccccagctaacacacctgactccaataatcaacgaatcatgatcttcagtttagaacgcaatttgattaatcagctgtgtttgatAGGATGGAGGTAAAAGAAAGACACCAATCAGAACCAATCAGAGGACTGGAGCTGCAAACCCCTGGACTAGACCCTTACCTCCATTTAATGTTCTGTTAGGAGGGACTAGACCGAGGGAGGGCTAGTGTCTGTTGTCCGTTAGTCTTTCCCCCGTTCATGTGTGTGTACGGGATGTGTTCCTCGTAGTTGTTTTGTCTCAACCCCAGTGACGAACCCGCCTCGTCCCGCTCAGAGCTGTGGTCCCTTCTCTGGGAGTAGGAGGAACTGTGGTCCCCTCTCTGGGAGTAAGATGAACTGTGGTCCCCTCTCTGGGAGTAAGAGGATGGGTCTAGGGGAATGCTCTCCATGTTGTCCATGTCCAGGTCAAAGTCCTCCTGCTCCGGAGGCTTGTTCTCCTGGCTATAGTAGAAGGAGACCTCCTGGAAGGACTGGTGAAGGTCCTTGTGGAGCATCTCAATGATCTCCTGGAAGCTGGGACGCAGCTTGGGGTTGTACTGCCAGCA
>TU856132
TGTTGCACCACACTGCTTTATTTATCTAGAGCAGACAGTTTGATATCAACGGGCcaagctcctcctcctcctcctcctcctcctcctcctcttactgTGCATCTGATACGGAGAGGAAAGACCAAGTGCTGCTGGTCGATCACAAGTCCAAATGATTATTAGTATGATTTCTGGATTAGAAACAATAAACATAAAAGACAAACATGTAAACAGACCGGAAATACCTCATGAAACACAATGTCAACAACTATGTAGAAAAAAACCAtcaataatatatttatatatatatatatatttatattttctatACCCACTAAAATATACCAAAAGAAGCATCTATTGGTCATCTGaggaactctttttttttttttttgtaaaaatgtctccCCCCCTCAGATTTTTAAATATCCTTCAGCTGTAAATGTGAAAACTCAAAATGAGAAAATGAaacctaaataaataaaaaaaatataaccaAAGAAATATGTTAATTCTTTATGTGATGTTTGTAATACTGCAGAGTGTGAGGAGAGATGACAACAAGCTTCTCCAGTGGATCGATAAAGTTTGTTCGAAGATTCGAAAATGGATTTGACACATTCATCAATCCAAAAGTTAGCTAGTTCTCAAGTCTCAGAAAGTCTGTCGTTCCTTGACAACTTGAGAGTACAAAGAGTCAGAGACACAGCTCCATGACATTCGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTCGATGCaggtcacagacagacacacagctccaTGACATTAGATGCaggtcacagacagacacacagctccaTGACATTCGATGCAGGTTACAGACAGAGATAAAAGGGCACTTTTACACTGAGCGACACCATGGGGGATCTCCATGGCCCAGGGAGACCTAGGGACCCAGCGAGGGCTGAGCTGCCCAGGGAGAGAGCCTCAGCTTGGGGAAGGGACAGTCTGGAAAGTCCTGGGGTTAGCAGCCTTCAGGTTGACCCAAAGTTTAATTATTTTCACAGTTGATTTCTACCTCCGCCACACATTCGTGGAAACTTGGCAATATAAAAAAAAGATTGAGGACAAGAGAGAAGCAGTAGAGAGGGAGGTTCGTCTTTCTTGAATACAAAAAGTGTACATGTGGTTGGTTGCATGTTCTCTCCTGGTTGACATTGGACAACATggctacatactgtagtgtaATGAGGGTGGCATCTTGACAACAGAGAGCAATAATGTCCTTGAGATGTGTACTTCCAGGAGGCCTCTGAACAAGTGAAAAAAGTAATCatctatacaaaacaacaaaactatATTCATATCAATTAATCTGTGTGAGAGAAAGACATGGGGATAATGTTCTGTTACGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGATCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCAATATAATGTTCTGTTAGGAGGGACCTAGACCCTTACCCCAATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTGGATAGACCCTTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTATGAGGGACTAGATAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCGTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCCCTACCCCATATAATGTTCTGTTAGGAGGGACTAGACCGAGGGTGGGCACTTCCAGTCCTCGTGGGCCTGATAGGTGTCAAagttttgccccagctaacacacctgactccaataatcaacgaatcatgatcttcagtttagaacgcaatttgattaatcagctgtgtttgatAGGATGGAGGTAAAAGAAAGACACCAATCAGAACCAATCAGAGGACTGGAGCTGCAAACCCCTGGACTAGACCCTTACCTCCATTTAATGTTCTGTTAGGAGGGACTAGACCGAGGGAGGGCTAGTGTCTGTTGTCCGTTAGTCTTTCCCCCGTTCATGTGTGTGTACGGGATGTGTTCCTCGTAGTTGTTTTGTCTCAACCCCAGTGACGAACCCGCCTCGTCCCGCTCAGAGCTGTGGTCCCTTCTCTGGGAGTAGGAGGAACTGTGGTCCCCTCTCTGGGAGTAAGATGAACTGTGGTCCCCTCTCTGGGAGTAAGAGGATGGGTCTAGGGGAATGCTCTCCATGTTGTCCATGTCCAGGTCAAAGTCCTCCTGCTCCGGAGGCTTGTTCTCCTGGCTATAGTAGAAGGAGACCTCCTGGAAGGACTGGTGAAGGTCCTTGTGGAGCATCTCAATGATCTCCTGGAAGCTGGGACGCAGCTTGGGGTTGTACTGCCAGCA

Function

NR:

description
PREDICTED: insulin-like growth factor 1 receptor isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU856122 False 2974 lncRNA 0.44 3 82826254 82829732
TU856126 False 3056 lncRNA 0.45 2 82826254 82829732
TU856132 True 3056 lncRNA 0.45 2 82826254 82829732

Neighbor

gene id symbol gene type direction distance location
LOC110530781 sppl2b coding upstream 68249 82728482 ~ 82758005 (+)
LOC110530778 LOC106590523 coding upstream 161233 82664195 ~ 82665021 (+)
LOC110530773 LOC106569595 coding upstream 291114 82525950 ~ 82535140 (+)
scp2a scp2 coding upstream 441396 82362119 ~ 82384858 (+)
czib cssa14h1orf123 coding upstream 464353 82359203 ~ 82361901 (+)
trnaa-ugc-28 NA coding downstream 32379 82862111 ~ 82862184 (+)
LOC110530786 LOC106569613 coding downstream 346002 83175734 ~ 83204194 (+)
LOC118965639 NA coding downstream 369607 83199339 ~ 83204020 (+)
LOC110530792 NA coding downstream 401543 83231275 ~ 83281525 (+)
cplx4c LOC106569619 coding downstream 487012 83316744 ~ 83328050 (+)
G753823 NA non-coding upstream 42529 82783431 ~ 82783725 (+)
G753805 NA non-coding upstream 84803 82740969 ~ 82741451 (+)
G753799 NA non-coding upstream 98325 82727125 ~ 82727929 (+)
G753798 NA non-coding upstream 101019 82724907 ~ 82725235 (+)
G753778 NA non-coding upstream 127132 82698856 ~ 82699122 (+)
G753883 NA non-coding downstream 48190 82877922 ~ 82878584 (+)
G753957 NA non-coding downstream 191321 83021053 ~ 83023277 (+)
G753981 NA non-coding downstream 204511 83034243 ~ 83034574 (+)
G753959 NA non-coding downstream 233450 83063182 ~ 83064030 (+)
G753958 NA non-coding downstream 235054 83064786 ~ 83068093 (+)
G753337 NA other upstream 900095 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 1023969 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 1338644 81486820 ~ 81487610 (+)
G752398 NA other upstream 2084309 80741604 ~ 80741945 (+)
G752357 NA other upstream 2192202 80631310 ~ 80634052 (+)
G754927 NA other downstream 426007 83255739 ~ 83257866 (+)
G755286 NA other downstream 799640 83629372 ~ 83629738 (+)
G755277 NA other downstream 823313 83653045 ~ 83654438 (+)
G755298 NA other downstream 828365 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 956228 83785960 ~ 83788580 (+)

Expression


Co-expression Network