G754864


Basic Information

Item Value
gene id G754864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 83205744 ~ 83208931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU857361
GTGCCAGTGACTGGTCGAGACTTGGTCTTCCTCTTTTTGTTAATCAGCTCATGTTTAAAACAAATACAATATGTAAAACCACCAtgtggagatacaactcaccactataactgttcctctgtctggagatacaactcaccactataactgttcctctgtctggagatacaactcaccactataactgtccctctgtctggaaatacaactcaccactataactgttcctctgtctggagatacaactcaccactataactgttcctctgtctggagatacaactcaccactacaactgttcctctggagatacaactcaccactataactgttcctctggagatacaactcaccactataactgttcctctgtctggagatacaactcaccactagaactgttcctctgtctggagatacaactcaccactataactgttcctctggaaatacaactcaccactataactgttcctctgtctgtagatacaactcaccactagaactgttcctctgtctggagatacaactcaccactataactgttcctctggaaatacaactcaccactagaactgttcctctgtctgtagatacaactcaccactagaactgttcctctgtctggagatacaactcaccactataactgttcctctggaaatacaactcaccactataactgttcctctggagatacaactcaccactataactgttcctctgtctggagatacaactcaccactataactgttcctctggaaaTACagctcaccactataactgttcctctgtctggagatacaactcaccactataactgttcctctgtctggagatacaactcaccactataactgttcctctggaaatacaactcaccactatgactgttcctctgtctgtagatacaactcaccactataactgttcctctgtctggagatacaactcaccactataactgttcctctggaaatacaactcactactataactgttcctctggaaatacaactcaccactataactgttcctctggagatacaactcaccactataactgttcctctggaaatacaactcaccactacaaCTGTTCCTCTTCCTTAGCCATTTTGTTTTCCTCCCAGTTGTGCTGTCTATC

Function

NR:

description
NLR family CARD domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU857361 True 1149 lncRNA 0.42 2 83205744 83208931

Neighbor

gene id symbol gene type direction distance location
LOC110530786 LOC106569613 coding upstream 1550 83175734 ~ 83204194 (+)
LOC118965639 NA coding upstream 1724 83199339 ~ 83204020 (+)
trnaa-ugc-28 NA coding upstream 343560 82862111 ~ 82862184 (+)
LOC110530781 sppl2b coding upstream 447739 82728482 ~ 82758005 (+)
LOC110530778 LOC106590523 coding upstream 540723 82664195 ~ 82665021 (+)
LOC110530792 NA coding downstream 22344 83231275 ~ 83281525 (+)
cplx4c LOC106569619 coding downstream 107813 83316744 ~ 83328050 (+)
LOC110530794 LOC106569618 coding downstream 152457 83361388 ~ 83380929 (+)
calr3b LOC106569608 coding downstream 181763 83390694 ~ 83399592 (+)
LOC110530798 LOC106569607 coding downstream 196428 83405359 ~ 83473827 (+)
G753958 NA non-coding upstream 137651 83064786 ~ 83068093 (+)
G753959 NA non-coding upstream 141714 83063182 ~ 83064030 (+)
G753981 NA non-coding upstream 171170 83034243 ~ 83034574 (+)
G753957 NA non-coding upstream 182467 83021053 ~ 83023277 (+)
G753883 NA non-coding upstream 327160 82877922 ~ 82878584 (+)
G754916 NA non-coding downstream 14341 83223272 ~ 83224112 (+)
G754935 LOC106569611 non-coding downstream 33397 83242328 ~ 83244775 (+)
G754946 NA non-coding downstream 51068 83259999 ~ 83266306 (+)
G754989 NA non-coding downstream 91827 83300758 ~ 83300978 (+)
G753337 NA other upstream 1279585 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 1403459 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 1718134 81486820 ~ 81487610 (+)
G752398 NA other upstream 2463799 80741604 ~ 80741945 (+)
G752357 NA other upstream 2571692 80631310 ~ 80634052 (+)
G754927 NA other downstream 46808 83255739 ~ 83257866 (+)
G755286 NA other downstream 420441 83629372 ~ 83629738 (+)
G755277 NA other downstream 444114 83653045 ~ 83654438 (+)
G755298 NA other downstream 449166 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 577029 83785960 ~ 83788580 (+)

Expression


Co-expression Network