G754916


Basic Information

Item Value
gene id G754916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 83223272 ~ 83224112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU857428
CGGAGGtgaatttatttttaatacaccCACTCTTCACCATGCTTATTGTATCTAGAACAACACCTTCAACAAAAACAACACCAATTGTAAAATGTAGGTTTGAGCGGCATATAAACAATTTTACATTACAATGTaaaagaaaataaaataacattcgCTCACTCATGCATACATACTTACAAAGTAAAAGAAAATCTATTATTACATTGATACTTAGCACATACAAGACCAGGCGTTTTGCAACGTATTAATTATGGCCACGAAGTGGTTATTAAAGACGTACTCAACTGCATCTAACGATACTACAAGTGCAGAGCAAACATCAAAGCATACAAATAATATTATTCGAGCATAATGTCTAATTCAAGCACAGGCACTTTTTCCATTCCATTTTCCAAGATCAtgctaaaaaaatacaaaaatatcccTCTTCTTCAAAGGATTTGTTACATCGATAAAAATACACAATGTCATGACATCTCATAATCCTCGGTAATTAGTAACAAAATGCCTTCTTTAGTACAGATTTCCAAACATATGACACACTAAAGAATTGAAGGAATGTCATCAACAGaggaatgtaaaaaaacaaacaaatctaTCTACAACAGCTATTGGCCGCAACAACCGGTTGAGATTGCTGCTGTTTACAGTACTTAAAGGGACAAGAGGACAAATACCTCAGAATCCATGGCAAGCTTTAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU857428 True 704 lncRNA 0.34 2 83223272 83224112

Neighbor

gene id symbol gene type direction distance location
LOC110530786 LOC106569613 coding upstream 19078 83175734 ~ 83204194 (+)
LOC118965639 NA coding upstream 19252 83199339 ~ 83204020 (+)
trnaa-ugc-28 NA coding upstream 361088 82862111 ~ 82862184 (+)
LOC110530781 sppl2b coding upstream 465267 82728482 ~ 82758005 (+)
LOC110530778 LOC106590523 coding upstream 558251 82664195 ~ 82665021 (+)
LOC110530792 NA coding downstream 7163 83231275 ~ 83281525 (+)
cplx4c LOC106569619 coding downstream 92632 83316744 ~ 83328050 (+)
LOC110530794 LOC106569618 coding downstream 137276 83361388 ~ 83380929 (+)
calr3b LOC106569608 coding downstream 166582 83390694 ~ 83399592 (+)
LOC110530798 LOC106569607 coding downstream 181247 83405359 ~ 83473827 (+)
G754864 NA non-coding upstream 14341 83205744 ~ 83208931 (+)
G753958 NA non-coding upstream 155179 83064786 ~ 83068093 (+)
G753959 NA non-coding upstream 159242 83063182 ~ 83064030 (+)
G753981 NA non-coding upstream 188698 83034243 ~ 83034574 (+)
G753957 NA non-coding upstream 199995 83021053 ~ 83023277 (+)
G754935 LOC106569611 non-coding downstream 18216 83242328 ~ 83244775 (+)
G754946 NA non-coding downstream 35887 83259999 ~ 83266306 (+)
G754989 NA non-coding downstream 76646 83300758 ~ 83300978 (+)
G754996 NA non-coding downstream 87647 83311759 ~ 83319176 (+)
G753337 NA other upstream 1297113 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 1420987 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 1735662 81486820 ~ 81487610 (+)
G752398 NA other upstream 2481327 80741604 ~ 80741945 (+)
G752357 NA other upstream 2589220 80631310 ~ 80634052 (+)
G754927 NA other downstream 31627 83255739 ~ 83257866 (+)
G755286 NA other downstream 405260 83629372 ~ 83629738 (+)
G755277 NA other downstream 428933 83653045 ~ 83654438 (+)
G755298 NA other downstream 433985 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 561848 83785960 ~ 83788580 (+)

Expression


Co-expression Network