G754927



Basic Information


Item Value
gene id G754927
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 83255739 ~ 83257866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU857445
GGTCAAATAATATGGTAGAGGCTGTTCGATAGCAAGAACTGGAGTATCTTGATTGGATTTTTCCAACAAAATTGTATTACAAACAATGAACAGCacacactaatatatatatatataagaacaCATAATTTAAACAGTTAATTAGGTCATTTAAATGCATTGCATCATAGGTGTAAACAATAGATAAATGTAAAGTAAGATCTCTACATGGAAATAGAGGAATTGAGACAGCTCATCAATGAACCAGGAAACTAAGATCATCCGTAGTGTTTTGATCTGTCCTGTGTACCAGTCTGTCCTGTGTACCAGTCTGTCCTGTGTACCAGTCTGTCCTGTGTACCAGTCTGTCCTGTGTACCAGTCTGTGTACCAGTCTGTGTACCAGTCTGTGTACCAGTCTGTGTACCAGTCTGTCCTGTGTGCCAGTCTGTCCTGTGTGCCAGTCTGTCCTGTGTGCCAGTCTGTCCTGTGTACCAGTCTGTACTGTGTACCAGTCTGTACTGTGTACCAGTCTGTACTATCATTCCATTCCTTGCCAAACATGGCATGACAAGAAGTGGCGAGGCGTGAAATGAtaacagaaacagactggtacccaggctagtttTTTACCCAGGATAGTTTTTTACCCAGGATAGTTTTTTACCCAGGATAGTTTTTTACAGAGGatagttttttaaattttatatCCCAGATGATGAGGAAGAAAATTTTAACCAGCATGCCATCTGTCTAGTAACCTTcagaaaacacaacaacacacactaaACTAAAAGATATTTCATTTGTTACAGTAGTAACAACCTTAATTTGGTCAGTTCAGAAGAGGAACTGCTTATATTGCACATTATTTAAAAACAATAGCATTTATACATTGAAGAAAAGAAGATAAATGTTTTGGTTATATCAAACATTATTGCTTGTTGCACACATATACCTTCATACTTGTATTACAGCAATGTTATTACATTAAtgttattacattacattattacaaTGTTATTACAACTATGTACATCTGGCTTGTACCAACCAAAGCCTGTTCTTGTCCCTTCAAAGGAAATAAACACATTTAACAGAATTCATCCAGCCATCTTGCATCAGCCCAATGCATGTTCATCATGCAGCAGGCTAGATCACAGCTGATTGATTCATGCAAGGAGAAATGGTAAGAGGAAGCGAGGCTATCTGCCAGGGTAGGTTTATTCCATGGGACAGAGGTCAGGCTATGTGCCAGAGTGGGTTTATTCCAATCGGAAAGAGGTCAGGCTATGTGCCAGGGTAGGTTTATTCCAATCAGAAAGAGGTCAGGCTATGTGCCAGGGTAGGTTTATTCCATGGGACAGAGGTCAGGCTATCTGCCAGGGTAGGTTTATTCCATGGGACAGAGGTCAGGCTATCTGCCAGGGTAGGTTTATTCCATGGGACAGAGGTCAGATTATCTGCCAGGGTAGATTTATTCCATGAGACAGGGGTCGTGCTATCAGCCAGGGAAGGTTTATTCCATGggacagacagaccagggtaTCTGCTGTGTGGAAAGTAAGACAAGGTAGGATGATGTTGATGTAATGTCAGGAGCCCTCTTCACCCACACACCAGTCCTCATCATTTCTCCATCAGTCCTTTATCTTCAGCCAAGAAGTCTTTTACCCTGATAGACAGTATCCTCATGAATCCTCAGCCGGGTTGTGGATTCTTGTTTTACCTGGAATGGTTTTAGATAGAGACACATTtaaatcatcatcattatcaccgccatcattaccatcatcatcatcatcactaccaccaccaacaacaacttcATATAAAGAACAATAGCTGAGCCCAGTAGCTGAATTCTCATCATTGATATCATTCCACTGAGGAACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU857445 True 1874 TUCP 0.41 4 83255739 83257866
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110530786 LOC106569613 coding upstream 51545 83175734 ~ 83204194 (+)
LOC118965639 NA coding upstream 51719 83199339 ~ 83204020 (+)
trnaa-ugc-28 NA coding upstream 393555 82862111 ~ 82862184 (+)
LOC110530781 sppl2b coding upstream 497734 82728482 ~ 82758005 (+)
LOC110530778 LOC106590523 coding upstream 590718 82664195 ~ 82665021 (+)
cplx4c LOC106569619 coding downstream 58878 83316744 ~ 83328050 (+)
LOC110530794 LOC106569618 coding downstream 103522 83361388 ~ 83380929 (+)
calr3b LOC106569608 coding downstream 132828 83390694 ~ 83399592 (+)
LOC110530798 LOC106569607 coding downstream 147493 83405359 ~ 83473827 (+)
LOC110530806 tpm4 coding downstream 454448 83712314 ~ 83727620 (+)
G754935 LOC106569611 non-coding upstream 10964 83242328 ~ 83244775 (+)
G754916 NA non-coding upstream 31627 83223272 ~ 83224112 (+)
G754864 NA non-coding upstream 46808 83205744 ~ 83208931 (+)
G753958 NA non-coding upstream 187646 83064786 ~ 83068093 (+)
G753959 NA non-coding upstream 191709 83063182 ~ 83064030 (+)
G754946 NA non-coding downstream 2133 83259999 ~ 83266306 (+)
G754989 NA non-coding downstream 42892 83300758 ~ 83300978 (+)
G754996 NA non-coding downstream 53893 83311759 ~ 83319176 (+)
G755002 NA non-coding downstream 72157 83330023 ~ 83330260 (+)
G755014 NA non-coding downstream 95344 83353210 ~ 83353486 (+)
G753337 NA other upstream 1329580 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 1453454 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 1768129 81486820 ~ 81487610 (+)
G752398 NA other upstream 2513794 80741604 ~ 80741945 (+)
G752357 NA other upstream 2621687 80631310 ~ 80634052 (+)
G755286 NA other downstream 371506 83629372 ~ 83629738 (+)
G755277 NA other downstream 395179 83653045 ~ 83654438 (+)
G755298 NA other downstream 400231 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 528094 83785960 ~ 83788580 (+)
G755363 NA other downstream 628948 83886814 ~ 83889637 (+)

Expression


G754927 Expression in all Baseline Samples

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G754927 Expression in each Bioproject

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G754927 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 80.
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Co-expression Network