G755043


Basic Information

Item Value
gene id G755043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 83468549 ~ 83470316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU857599
TGTAGGATCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACAACAACATTCCTGTATGTAGGATCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAAGATCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACAACAACATTCCTGGATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACAACAACATTCCTGGATGTAGGATCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAACAACATTCCTGTATGTAGGATCTGTACTCTGTACAGCAACATTCCTGTATTGCTTTGCCTTCTCCAAACCTGTCAAGAGTTCTCTCACATGACTTGGGTTGGGTGGTGACGGTGCTACTGTTTTGGTAAAATCAAGGGACCCTTTGCAAATTCAGAACACCTTTGGAGATTCACTTGGCAGCAGAAAAGATCGTTTTACTCTTCCTTCCTCGCCGGCAAAGAGTCTCTTCTAGAGGGGTTTGTTCTGTAAGTTTGAGCTCAATGGTTCTTCCTATTGTCCAGTCTCTGCCGCTGCTACTTTCTGCTTCCTGTTTGTAGTGGTCATCTCAGAACATCTAGAGCAGAATataagttgttgttttttgttttctgCTAATCACTCAGCACCTCGAGCTGCAGTAGCTGTTGCTTTGCAACCTTTCACCATTCAATAGATGATATGAATGTAACAATGGGATCACCTGTACCCTGGTGTTGACGAACAAACCTCAGCAGACATCAGGTTACCATCCTTCATCTTGTTTGAATGACCAGTTCCTGTTTCTCCTCTAGTCGCCAGTCTCCAGGGTTAGGATCAAATTCCAGATAATTCACTCAAGGACACttgaaattccaattct

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU857599 True 1170 lncRNA 0.41 3 83468549 83470316

Neighbor

gene id symbol gene type direction distance location
calr3b LOC106569608 coding upstream 68957 83390694 ~ 83399592 (+)
LOC110530794 LOC106569618 coding upstream 89717 83361388 ~ 83380929 (+)
cplx4c LOC106569619 coding upstream 140499 83316744 ~ 83328050 (+)
LOC110530792 NA coding upstream 187024 83231275 ~ 83281525 (+)
LOC118965639 NA coding upstream 264529 83199339 ~ 83204020 (+)
LOC110530806 tpm4 coding downstream 241998 83712314 ~ 83727620 (+)
LOC110530807 rab8a coding downstream 257753 83728069 ~ 83734239 (+)
LOC110531027 NA coding downstream 307378 83777694 ~ 83781404 (+)
LOC110529145 LOC106569623 coding downstream 315660 83785960 ~ 83788580 (+)
LOC110530810 LOC106569622 coding downstream 344351 83814667 ~ 83842323 (+)
G755062 NA non-coding upstream 16773 83449311 ~ 83451776 (+)
G755045 NA non-coding upstream 46298 83421625 ~ 83422251 (+)
G755030 NA non-coding upstream 83436 83384913 ~ 83385113 (+)
G755029 NA non-coding upstream 83901 83384279 ~ 83384648 (+)
G755028 NA non-coding upstream 85517 83382817 ~ 83383032 (+)
G755087 NA non-coding downstream 46110 83516426 ~ 83517179 (+)
G755222 NA non-coding downstream 82643 83552959 ~ 83553177 (+)
G755223 NA non-coding downstream 83597 83553913 ~ 83554236 (+)
G755225 NA non-coding downstream 87038 83557354 ~ 83557553 (+)
G755249 NA non-coding downstream 106215 83576531 ~ 83576748 (+)
G754927 NA other upstream 210683 83255739 ~ 83257866 (+)
G753337 NA other upstream 1542390 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 1666264 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 1980939 81486820 ~ 81487610 (+)
G752398 NA other upstream 2726604 80741604 ~ 80741945 (+)
G755286 NA other downstream 159056 83629372 ~ 83629738 (+)
G755277 NA other downstream 182729 83653045 ~ 83654438 (+)
G755298 NA other downstream 187781 83658097 ~ 83660046 (+)
G755363 NA other downstream 416498 83886814 ~ 83889637 (+)

Expression


Co-expression Network