XLOC_026492 (aoc2)



Basic Information


Item Value
gene id XLOC_026492
gene name aoc2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 32924185 ~ 32934359 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00051624
GATACTTCTGGCTCTTATCTCGGTGATACTCAACATTGTGCTGATATGCTTAAATTCGAATAAGCCTCCAAAATGCATGTCCCAGTCGCAGGCGTCCCTGAATCTGCAAGACACACATTCAGATAGAAGTCTGGTTTTTGCCGACCTGACCCCAGAGGAGTACAAGGCTGTTCGCGACTATATGTGGGCGCAGAAAGACTTGAAGATCTCCCATTCAGTATTAGCAAAGCCCTCGGACAACTTTCTCTTCTTAATTGACCTCTCGCTCCCGAAGAAGGCTGATGTCCTGAGATATTTGGATAAAGACGGACAGAAGCCCGCGCGCGAAGCGTCCGTCGTGGTTTTCTACGGCGAACACCGTTACCTGAAGGAGTATGTGGTGTCGTTATCTGGTCCGCTAACGCATCGTGATGTTACTGAGCAGAAGTACAAAACCAAGACGTTACCCTTCACAGCCAGAACGGTGACCATTGGAGAGTACGCGCAGCTCTTTACGCTCCTTTATGGAGTTTTCCAAAAACTCGAAACACCTCTGAGGGAAAGTTTTGGGTATAACCTACAAACAAATAAACTGCTGCCGTTTGAGGGCATGCCAAGAGGCATCAAAGCTGGTGACCGCAAGACCTGGATCTCCTTTTTCCGCGATTTCAGTGGCATGTACATCCATCCCGTAGGTTTCGAGATGCTGATCAATCACGAAAGCAGCAACTCGTCCGACTGGACGGTTGACAAGTTGCTGTACAACGGCCAATATTTTAACAGCATTGACGCCTTTATAAAACGTTACCAAGCGGGTGATTTAGAAAAGATAGTCTACAAAAAGATCGAAAACTTCGCCTCGTTAAAGCCGAGGGAAAAGCCTACTGGCCTAGGACCACAACAGTATTATCTTCAAGGTAAACGTTTCAGCGTTAAAAACAACCAGGTGGTTTATTTAGACTGGAACTTTGCATTTGGCATGAGCTCTCTGACTGGGATGAGAGCGTTTGATATTCGTTTTGAAGGGCAGAGGATAGCGTATGAGCTGAGCGTGCAGGAGGCGATGTCTGTCTACGGCTCCACCACACCTGGGATGATCCTCACCAAGTTCCTCGACTCCAGTATCGGAATCGGTCGCTTCGCTCACGAGCTCGTGCGCGGGATCGACTGCCCGTACGGGGCCACATATGTAGACACGCACCGCTACATCGACACGAACGTCACGCAGCGTTTCAGAAACTCCATCTGTGTGTTTGAGCATGACATCGGGCGACCTCTGCGACGACACTTCTCAGATTTCTTTCACAATAGTTACGGTGGGATGGCGAACAGCGCCCTGGTGATCCGCTCCATTACTGCTATAGGGAACTATGACTACATATGGGACTTCATTTTCTATCAGAGTGGCTCAGTGGAGGCAAGAGTTCACGCCACCGGCTACATATCATCCTCCTTTTTGGTTGATGGAAATCTGAAGTATGGTCACCAGGTTGCAGAAAACGtcctaggaaacatccatacgcattTCATCAGCTTTAAAGTTGACCTTGATATCTTGGGTGAGAAGAATATATTTCAGACTAAAGACATGGTGTATGAGGAGGTGCCATTGCCATGGATGCCCACAGAGAAAGCAAAGATACCACGACTGGTGGAGCAACAAGTCAAGACAGAGAAAGAAGCAGCAATGCTTCATGGTGCCAAAACACCCCGTTACCTTCATATAGCCAGTAAGCAAACTAATCGCTGGGGCCACAATCGCTCTTACAGGCTTCAGGTGTTGAGCTTTGCTGGAGACCCCCTGCCTGAAAGTGAGTCTACAGAGAAGTCTATGTCCTGGGCTCGGTATAAGGTTGCTATAACCAAGCATAAAGATGAAGAGCAGACCAGTAGCAGTCTATACAGTCAGAATTACATGTGGAAACCATTTGTGGACTTCAGCAAATATATAGAAGATAATGAGACAATCGACAACGAGGACTTGGTTGCCTGGGTCACTGCTGGTTTCCTACACATTCCTCATGCAGAAGACATACCCAACACTGTTACGGTGGGCAATGGTGGCGGTGTCCTCATTAGGCCACACAACTATTTCAATGAAGATCCGTCCATACACTCACCTGATGGTGTGCATTTTATTCCGGGCTCTGAAAATGACTGTGAGTACAACAAAATGGCGTGTCTGGAAAAGGATCAGTGCACTTCCACACTGGAGCCATTCACTTACCACGGCTTTGAAGGTGTTATGCAGTTTGAGTGAAAATTTTGATGCAAATTTCCATGTTGCTACAGATTTGCTAATACATTTGCAGTAGTATATCCTCACTCTCTGCTTTTTAGTTAATTGGAAAAAAGTATTTCCTGCTTTTGTAGCTGACTATgtaaatattattgatattttctcattttctgtTTACCAGAAGTGTGCTTTGTGaattttagttattttcatttttgtacatTTGGTGAACTTTTTGTAAATTGCTtcaaatgtatcatttattatcaAATCATATAATTTAGGGTATACCATAGCTCTTTAAGGCAGGgctgtttttattatacaatgtaAACTCTAAAGAGAGAGATTTCTAACAACTCTGAGAAATGCACTGATAAAACACCTCACAAAGTATACacttatttttataaacatttttatgccgttcaataaaaaatgaaacat
>TCONS_00051625
GGGAGCTTAGCTGGTTTTGAAACACAGTCTTTGAGTCAACATTGCCTATGAGCTTAGTGCTGCATCCACACATACATGACAGATGTTTCCTCTCCTCGTAGAGTACAAAACGCCTTTGAAATGATGGTCTAATCTAAATAGAAGATATACAACGCAAGGattaaacaatacttttacaTGTAAATATGGCTGCTGCTTAATTCGTGCGCTTTGGGCAAAATGGTCGCCTGGCCCTTTCTCTCTTAATCATTAAGCTTTTACACCATGCCGCTCGTCGAATAAACTCACAAGAGAAGTTAATGTTACAACAGATGTCTAGTAAAACTGCTCTAAACGCTTGAGAGAGACATCGGATGACTTCGAGGTGAAAGCCTTTGCGGCATCAAGGTGAGAAGAATATATTTCAGACTAAAGACATGGTGTATGAGGAGGTGCCATTGCCATGGATGCCCACAGAGAAAGCAAAGATACCACGACTGGTGGAGCAACAAGTCAAGACAGAGAAAGAAGCAGCAATGCTTCATGGTGCCAAAACACCCCGTTACCTTCATATAGCCAGTAAGCAAACTAATCGCTGGGGCCACAATCGCTCTTACAGGCTTCAGGTGTTGAGCTTTGCTGGAGACCCCCTGCCTGAAAGTGAGTCTACAGAGAAGTCTATGTCCTGGGCTCGGTATAAGGTTGCTATAACCAAGCATAAAGATGAAGAGCAGACCAGTAGCAGTCTATACAGTCAGAATTACATGTGGAAACCATTTGTGGACTTCAGCAAATATATAGAAGATAATGAGACAATCGACAACGAGGACTTGGTTGCCTGGGTCACTGCTGGTTTCCTACACATTCCTCATGCAGAAGACATACCCAACACTGTTACGGTGGGCAATGGTGGCGGTGTCCTCATTAGGCCACACAACTATTTCAATGAAGATCCGTCCATACACTCACCTGATGGTGTGCATTTTATTCCGGGCTCTGAAAATGACTGTGAGTACAACAAAATGGCGTGTCTGGAAAAGGATCAGTGCACTTCCACACTGGAGCCATTCACTTACCACGGCTTTGAAGGTGTTATGCAGTTTGAGTGAAAATTTTGATGCAAATTTCCATGTTGCTACAGATTTGCTAATACATTTGCAGTAGTATATCCTCACTCTCTGCTTTTTAGTTAATTGGAAAAAAGTATTTCCTGCTTTTGTAGCTGACTATgtaaatattattgatattttctcattttctgtTTACCAGAAGTGTGCTTTGTGaattttagttattttcatttttgtacatTTGGTGAACTTTTTGTAAATTGCTtcaaatgtatcatttattatcaAATCATATAATTTAGGGTATACCATAGCTCTTTAAGGCAGGgctgtttttattatacaatgtaAACTCTAAAGAGAGAGATTTCTAACAACTCTGAGAAATGCACTGATAAAACACCTCACAAAGTATACacttatttttataaacatttttatgccgttcaataaaaaatgaaaca
>TCONS_00051626
GAATATATTTCAGACTAAAGACATGGTGTATGAGGAGGTGCCATTGCCATGGATGCCCACAGAGAAAGCAAAGATACCACGACTGGTGGAGCAACAAGTCAAGACAGAGAAAGAAGCAGCAATGCTTCATGGTGCCAAAACACCCCGTTACCTTCATATAGCCAGTAAGCAAACTAATCGCTGGGGCCACAATCGCTCTTACAGGCTTCAGGTGTTGAGCTTTGCTGGAGACCCCCTGCCTGAAAGTGAGTCTACAGAGAAGTCTATGTCCTGGGCTCGGTAAGGTCTTATTGTTTTGAGTCAGAATACTGAAACACATGCATGTTTTAAAAGAGCTGTTTATTGCTTTAACCTCTCTCATTTGCTTCTACTTTTTCAGGTATAAGGTTGCTATAACCAAGCATAAAGATGAAGAGCAGACCAGTAGCAGTCTATACAGTCAGAATTACATGTGGAAACCATTTGTGGACTTCAGCAAATATATAGAAGATAATGAGACAATCGACAACGAGGACTTGGTTGCCTGGGTCACTGCTGGTTTCCTACACATTCCTCATGCAGAAGACATACCCAACACTGTTACGGTGGGCAATGGTGGCGGTGTCCTCATTAGGCCACACAACTATTTCAATGAAGATCCGTCCATACACTCACCTGATGGTGTGCATTTTATTCCGGGCTCTGAAAATGACTGTGAGTACAACAAAATGGCGTGTCTGGAAAAGGATCAGTGCACTTCCACACTGGAGCCATTCACTTACCACGGCTTTGAAGGTGTTATGCAGTTTGAGTGAAAATTTTGATGCAAATTTCCATGTTGCTACAGATTTGCTAATACATTTGCAGTAGTATATCCTCACTCTCTG
>TCONS_00051627
CATGGTGTATGAGGAGGTGCCATTGCCATGGATGCCCACAGAGAAAGCAAAGATACCACGACTGGTGGAGCAACAAGTCAAGACAGAGAAAGAAGCAGCAATGCTTCATGGTGCCAAAACACCCCGTTACCTTCATATAGCCAGTAAGCAAACTAATCGCTGGGGCCACAATCGCTCTTACAGGCTTCAGGTGTTGAGCTTTGCTGGAGACCCCCTGCCTGAAAGTGAGTCTACAGAGAAGTCTATGTCCTGGGCTCGGTATAAGGTTGCTATAACCAAGCATAAAGATGAAGAGCAGACCAGTAGCAGTCTATACAGTCAGAATTACATGTGGAAACCATTTGTGGACTTCAGCAAATATATAGAAGATAATGAGACAATCGACAACGAGGACTTGGTTGCCTGGGTCACTGCTGGTTTCCTACACATTCCTCATGCAGAAGACATACCCAACACTGTTACGGTGGGCAATGGTGGCGGTGTCCTCATTAGGCCACACAACTATTTCAATGAAGATCCGTCCATACACTCACCTGATGGTGTGCATTTTATTCCGGGCTCTGAAAATGACTGTGAGTACAACAAAATGGCGTGTCTGGAAAAGGATCAGTGCACTTCCACACTGGAGCCATTCACTTACCACGGCTTTGAAGGTGTTATGCAGTTTGAGTGA

Function


symbol description
aoc2 Predicted to enable copper ion binding activity; oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor; and quinone binding activity. Predicted to act upstream of or within amine metabolic process and visual perception. Orthologous to human AOC2 (amine oxidase copper containing 2) and AOC3 (amine oxidase copper containing 3).

GO:

id name namespace
GO:0009308 amine metabolic process biological_process
GO:0007601 visual perception biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0008131 primary amine oxidase activity molecular_function
GO:0005507 copper ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0048038 quinone binding molecular_function

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism
ko00350 Tyrosine metabolism
ko00360 Phenylalanine metabolism
ko00410 beta-Alanine metabolism
ko00950 Isoquinoline alkaloid biosynthesis
ko00960 Tropane, piperidine and pyridine alkaloid biosynthesis

ZFIN:

id description
ZDB-GENE-050320-133 Predicted to enable copper ion binding activity; oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor; and quinone binding activity. Predicted to act upstream of or within amine metabolic process and visual perception. Orthologous to human AOC2 (amine oxidase copper containing 2) and AOC3 (amine oxidase copper containing 3).

Ensembl:

ensembl_id ENSDARG00000014646

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00051624 False 2665 mRNA 0.45 4 32924185 32927516
TCONS_00051625 False 1513 mRNA 0.40 4 32924186 32934359
TCONS_00051626 False 866 lncRNA 0.44 2 32924539 32925497
TCONS_00051627 True 673 mRNA 0.47 3 32924611 32925476

Neighbor


gene id symbol gene type direction distance location
XLOC_026491 g6pcb coding downstream 11398 32906082 ~ 32912787 (-)
XLOC_026490 kat7a coding downstream 21915 32889796 ~ 32902270 (-)
XLOC_026489 zgc:113090 coding downstream 50544 32870185 ~ 32873641 (-)
XLOC_026488 si:dkey-16l2.20 coding downstream 64838 32855157 ~ 32859347 (-)
XLOC_026487 zgc:153733 coding downstream 92214 32821205 ~ 32831971 (-)
XLOC_026493 casp6b.1 coding upstream 18716 32953075 ~ 32958574 (-)
XLOC_026494 casp6a coding upstream 27129 32961488 ~ 32965848 (-)
XLOC_026495 casp6b.2 coding upstream 34845 32969204 ~ 32973554 (-)
XLOC_026496 CT583642.2 coding upstream 43502 32977861 ~ 32981430 (-)
XLOC_026497 CT583642.1 coding upstream 45610 32979969 ~ 33031799 (-)
XLOC_026483 NA non-coding downstream 320994 32598644 ~ 32603191 (-)
XLOC_026481 NA non-coding downstream 352133 32565194 ~ 32572052 (-)
XLOC_026477 NA non-coding downstream 586490 32325134 ~ 32337695 (-)
XLOC_026474 NA non-coding downstream 702100 32185899 ~ 32222085 (-)
XLOC_026469 NA non-coding downstream 966819 31935697 ~ 31957366 (-)
XLOC_026499 NA non-coding upstream 365835 33300194 ~ 33304123 (-)
XLOC_026500 CABZ01012959.1 non-coding upstream 409717 33344076 ~ 33345247 (-)
XLOC_026505 CR396582.3 non-coding upstream 489833 33424192 ~ 33424328 (-)
XLOC_026509 CU695077.1 non-coding upstream 747159 33681518 ~ 33690754 (-)
XLOC_026511 NA non-coding upstream 984207 33918566 ~ 33919195 (-)

Expression



Co-expression Network