G755272


Basic Information

Item Value
gene id G755272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 83606898 ~ 83607494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU857878
gtttaacctctttatcctaccccctcctttttcgaacattctgttaaaaatcgcgcaacatttcagcgtcctgctactcatgccaggaatatagtatatgcatatgattagtatgtgtggatagaaaacactctgaagtttctaaaactggttaaatcacggctgtgactataacagagcgtgtgtttcatcgaaaagcgcaagaaaaactggtcactgaaatctgaaaaaagtatccatgcgcccctttcatggattatttaaaggaaaccaaatttaatatggagacggatgcaattcctacagcttccacacgatgtcgccaaaaacgtcattttcattgctgattccatccagcctacctcaatcgattttggaagattgaaaaatggacactgttttcttttgtagctgctattgaatacagatcgcccagtgatcaatttgatcgcttattaacgtttacaaatacctaaagttgggttataaaagtaggttgaagtgttttgtcaaagaatataggcaacttatataatttttaaacatgacgttgcgtgttggaagatagcttttttcgtgatgcagacaggctataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU857878 True 597 lncRNA 0.38 1 83606898 83607494

Neighbor

gene id symbol gene type direction distance location
LOC110530798 LOC106569607 coding upstream 134646 83405359 ~ 83473827 (+)
calr3b LOC106569608 coding upstream 207306 83390694 ~ 83399592 (+)
LOC110530794 LOC106569618 coding upstream 228066 83361388 ~ 83380929 (+)
cplx4c LOC106569619 coding upstream 278848 83316744 ~ 83328050 (+)
LOC110530792 NA coding upstream 325373 83231275 ~ 83281525 (+)
LOC110530806 tpm4 coding downstream 104820 83712314 ~ 83727620 (+)
LOC110530807 rab8a coding downstream 120575 83728069 ~ 83734239 (+)
LOC110531027 NA coding downstream 170200 83777694 ~ 83781404 (+)
LOC110529145 LOC106569623 coding downstream 178482 83785960 ~ 83788580 (+)
LOC110530810 LOC106569622 coding downstream 207173 83814667 ~ 83842323 (+)
G755269 NA non-coding upstream 2235 83604454 ~ 83604663 (+)
G755249 NA non-coding upstream 30150 83576531 ~ 83576748 (+)
G755225 NA non-coding upstream 49345 83557354 ~ 83557553 (+)
G755223 NA non-coding upstream 52662 83553913 ~ 83554236 (+)
G755222 NA non-coding upstream 53721 83552959 ~ 83553177 (+)
G755273 NA non-coding downstream 68 83607562 ~ 83607790 (+)
G755274 NA non-coding downstream 3128 83610622 ~ 83610836 (+)
G755279 NA non-coding downstream 8366 83615860 ~ 83616221 (+)
G755281 NA non-coding downstream 11769 83619263 ~ 83619472 (+)
G755287 NA non-coding downstream 22768 83630262 ~ 83630478 (+)
G754927 NA other upstream 349032 83255739 ~ 83257866 (+)
G753337 NA other upstream 1680739 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 1804613 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 2119288 81486820 ~ 81487610 (+)
G752398 NA other upstream 2864953 80741604 ~ 80741945 (+)
G755286 NA other downstream 21878 83629372 ~ 83629738 (+)
G755277 NA other downstream 45551 83653045 ~ 83654438 (+)
G755298 NA other downstream 50603 83658097 ~ 83660046 (+)
G755363 NA other downstream 279320 83886814 ~ 83889637 (+)

Expression


Co-expression Network