Gene
RNA
| Item | Value |
|---|---|
| gene id | G755279 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 83615860 ~ 83616221 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU857888 | True | 260 | lncRNA | 0.38 | 2 | 83615860 | 83616221 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530798 | LOC106569607 | coding | upstream | 143608 | 83405359 ~ 83473827 (+) |
| calr3b | LOC106569608 | coding | upstream | 216268 | 83390694 ~ 83399592 (+) |
| LOC110530794 | LOC106569618 | coding | upstream | 237028 | 83361388 ~ 83380929 (+) |
| cplx4c | LOC106569619 | coding | upstream | 287810 | 83316744 ~ 83328050 (+) |
| LOC110530792 | NA | coding | upstream | 334335 | 83231275 ~ 83281525 (+) |
| LOC110530806 | tpm4 | coding | downstream | 96093 | 83712314 ~ 83727620 (+) |
| LOC110530807 | rab8a | coding | downstream | 111848 | 83728069 ~ 83734239 (+) |
| LOC110531027 | NA | coding | downstream | 161473 | 83777694 ~ 83781404 (+) |
| LOC110529145 | LOC106569623 | coding | downstream | 169755 | 83785960 ~ 83788580 (+) |
| LOC110530810 | LOC106569622 | coding | downstream | 198446 | 83814667 ~ 83842323 (+) |
| G755274 | NA | non-coding | upstream | 5024 | 83610622 ~ 83610836 (+) |
| G755273 | NA | non-coding | upstream | 8070 | 83607562 ~ 83607790 (+) |
| G755272 | NA | non-coding | upstream | 8366 | 83606898 ~ 83607494 (+) |
| G755269 | NA | non-coding | upstream | 11197 | 83604454 ~ 83604663 (+) |
| G755249 | NA | non-coding | upstream | 39112 | 83576531 ~ 83576748 (+) |
| G755281 | NA | non-coding | downstream | 3042 | 83619263 ~ 83619472 (+) |
| G755287 | NA | non-coding | downstream | 14041 | 83630262 ~ 83630478 (+) |
| G755292 | NA | non-coding | downstream | 27677 | 83643898 ~ 83644136 (+) |
| G755294 | NA | non-coding | downstream | 30110 | 83646331 ~ 83646550 (+) |
| G755297 | NA | non-coding | downstream | 39851 | 83656072 ~ 83656340 (+) |
| G754927 | NA | other | upstream | 357994 | 83255739 ~ 83257866 (+) |
| G753337 | NA | other | upstream | 1689701 | 81922162 ~ 81931491 (+) |
| sdhc | LOC106569582 | other | upstream | 1813575 | 81783282 ~ 81802285 (+) |
| G753205 | LOC106569572 | other | upstream | 2128250 | 81486820 ~ 81487610 (+) |
| G752398 | NA | other | upstream | 2873915 | 80741604 ~ 80741945 (+) |
| G755286 | NA | other | downstream | 13151 | 83629372 ~ 83629738 (+) |
| G755277 | NA | other | downstream | 36824 | 83653045 ~ 83654438 (+) |
| G755298 | NA | other | downstream | 41876 | 83658097 ~ 83660046 (+) |
| G755363 | NA | other | downstream | 270593 | 83886814 ~ 83889637 (+) |
