G755889


Basic Information

Item Value
gene id G755889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84141804 ~ 84144920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU858585
tagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtattagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtattagtgccctactttaaccagggtctataggtattagtgccctactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtattagtgcactactttaacc
>TU858584
tagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtattagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgaactactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtattagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgcactactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgccctactttaaccagggtctataggtagtagtgagctactttaaccagggtctataggtagtagtgcactactt

Function

NR:

description
PREDICTED: apolipoprotein B-100-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU858585 False 612 lncRNA 0.43 3 84141804 84144920
TU858584 True 1828 lncRNA 0.44 2 84142301 84144920

Neighbor

gene id symbol gene type direction distance location
LOC118965621 NA coding downstream 103468 84036777 ~ 84038336 (-)
LOC118965640 NA coding downstream 137275 84003317 ~ 84004529 (-)
cdcp2 cdcp2 coding downstream 183021 83954240 ~ 83958783 (-)
tmem59 tmem59 coding downstream 191014 83934563 ~ 83960923 (-)
LOC110530817 ldlrad1 coding downstream 215887 83922742 ~ 83925917 (-)
LOC118965567 NA coding upstream 351514 84496434 ~ 84497690 (-)
gorasp1a LOC106569800 coding upstream 1001988 85146908 ~ 85156401 (-)
LOC110530840 LOC106569802 coding upstream 1018865 85163785 ~ 85201362 (-)
LOC118965570 LOC106569806 coding upstream 1103430 85248350 ~ 85267794 (-)
LOC118965571 LOC106569806 coding upstream 1129821 85274741 ~ 85294926 (-)
G755886 NA non-coding downstream 10909 84130466 ~ 84130895 (-)
G755883 NA non-coding downstream 17990 84123608 ~ 84123814 (-)
G755881 NA non-coding downstream 18924 84122574 ~ 84122880 (-)
G755877 NA non-coding downstream 24623 84116943 ~ 84117181 (-)
G755867 NA non-coding downstream 48846 84092726 ~ 84092958 (-)
G755893 NA non-coding upstream 3207 84148127 ~ 84148755 (-)
G755919 NA non-coding upstream 61390 84206310 ~ 84206629 (-)
G755933 NA non-coding upstream 88908 84233828 ~ 84234071 (-)
G755934 NA non-coding upstream 91064 84235984 ~ 84236454 (-)
G755939 NA non-coding upstream 97712 84242632 ~ 84242840 (-)
ccl25a ccl21 other downstream 342621 83721046 ~ 83799203 (-)
G755142 NA other downstream 760831 83378942 ~ 83380973 (-)
G754333 NA other downstream 2169715 81970600 ~ 81972089 (-)
G754276 NA other downstream 2220272 81920002 ~ 81921532 (-)
G754262 NA other downstream 2306669 81833962 ~ 81835135 (-)
G755959 NA other upstream 152245 84297165 ~ 84297535 (-)
G756592 NA other upstream 269567 84414487 ~ 84415800 (-)
G756727 NA other upstream 502544 84647464 ~ 84648224 (-)
G757086 NA other upstream 1257698 85402618 ~ 85404005 (-)
G756981 NA other upstream 1268511 85413431 ~ 85414702 (-)

Expression


Co-expression Network