XLOC_026501 (si:dkey-283b1.6)


Basic Information

Item Value
gene id XLOC_026501
gene name si:dkey-283b1.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 33389023 ~ 33395233 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051649
TGGCCATAAAAGTGTTCAAACTTCACTATCAGCACTTTAAACCCTCCGCCAGATAAGGCTCCGGCTCAAATCAGAGCAGAGCACTTGTGGTCTACAACACCGCCTTCATCATCTGTGCTGTTCGAGATTTTTTCTGAGATCTGAGGGATTTTCTTGAAAGATTCTTCATTGCCATGGATAATGATGATCAATTCCTAATATTTAAGATCTTCATGCCTATCGTATCCTTCGGGATGCTGTCCATCTGCTGTGCTGGTTTCTGTAAAATGTTCCAGCGGTTTCGTAAGGAGCGTATAGAGCGCCTACAGGCTCAAGCTCGACATATGGATAGGCCGTCCGTGTACGTCATTCCCATCACTTTATCTGAGGATGATCTGCACAGACCCCCACGCTACAGCACAGTCCAGTTCTGTGAGGCTCCTCCGTCTTATAATGAGCTAAACCTGAAGCCTGAAGTGTCTCCTCTGGAACCTCCTCCTGATTATACAGAGTCCGTCTTTTCTTCTGGCTCATATTCATGATTTATCAACAGATCAAACTCACAGTAAGAGTTTTCCAGAGTACTTGGACTGGTTTGAAGAAAAATACGGATAACATGGTATCCTCATGGTTTTCCAAGGACTGCTATACAGTACATGCTGGCTATGCAAAGATTGAAATTATGAAGAAAAAAGCCTCACAGTTATgaaataatttgttaataaaaacacccttagtaaatatgagcaaagaatataaggaaaaaaaattatttcatatttaggATCTTTTGCTCAAAATATTAACAAAGAAATTAAGTCGTTCGATTTTGGATAACAGTaagagttttttcttttttttcaaaccCTTTCAGAGAGTTTGTTGTGATTTTGGTGAGGTTGGCTTGTAGTTTTAGAGACTTTTTGACTCTAAGATTCAACTAACATTTGCAGTTCTCCAGTCGTGattcttgaaaaaaatgtttaccGCTCGAACCATCCTAACAGTGCGTTTGAACAAAAAACACATTGACTTTCAGCCAATTCATAACACCTACAACTAAGTTGCGCTTGTTAATTATTGCCATAATGATCAAAAGGgaaatttttctgttttttggtATTTTCTTTTAGCCACTTCCCATTTTGTGAAGctcaacaacttttttttttcttaaaacacagCTCTGTTCCTTGGTTTTAACCACTGTGATGAATAACTGAGAGACTTTAGTCTTTGTGTTACCTCATATTTATAGCCCTGTGAAAAAGGTGTTGGTAGAAGGATTTTCTATTTCTAGtcaagaaaatgtatttaaaaaacaggAATATGCATATAAATTCATGGTAGAGCCAATAATTGTGACATATTTATCTTACGTATATTTAATGAagacatttgttttttgataaaaCTGTGCTGTGTTTGCACAAGTGTTTGCTCTCAGTGAGAGCAGAatgatttattcatattttgaaataatatcttgagcaaaaaaaaaaaaaaaacttttcaaactTCTTTGCTTGTAAATATCTAGTTTACCAACATCACTGGAGGGCTCTTCATAATAATATGTGATTCTGTTGGGATTTTAAACATCCTACAGGGTTTTATACAAAGTTTGTTTGCACAATGAGCAGAAATaacttgtttaaatgtttaatatatattctgttttaatgaatatttataaattgtgtacATAGCTAAACTGTTTTTGTTCATTTCAACATTTCTTATCTTTGTAAATATGATGTAAATTGTACAGCGAAAACTGTAACGAATACAATAAAACTGTTGTATATACACAGACCCTTAA

Function

symbol description
si:dkey-283b1.6 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-120215-112 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000104213

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051649 True 1801 mRNA 0.35 4 33389023 33395233

Neighbor

gene id symbol gene type direction distance location
XLOC_026500 CABZ01012959.1 coding downstream 43776 33344076 ~ 33345247 (-)
XLOC_026499 NA coding downstream 84900 33300194 ~ 33304123 (-)
XLOC_026498 rarab coding downstream 129402 33065613 ~ 33259621 (-)
XLOC_026497 CT583642.1 coding downstream 357224 32979969 ~ 33031799 (-)
XLOC_026496 CT583642.2 coding downstream 407593 32977861 ~ 32981430 (-)
XLOC_026502 abi3a coding upstream 709 33395942 ~ 33417826 (-)
XLOC_026503 ccdc103 coding upstream 24981 33420214 ~ 33422738 (-)
XLOC_026504 rpl23 coding upstream 28753 33423986 ~ 33427803 (-)
XLOC_026505 CR396582.3 coding upstream 28959 33424192 ~ 33424328 (-)
XLOC_026506 si:dkey-283b1.7 coding upstream 36958 33432191 ~ 33437796 (-)
XLOC_026483 NA non-coding downstream 785832 32598644 ~ 32603191 (-)
XLOC_026481 NA non-coding downstream 816971 32565194 ~ 32572052 (-)
XLOC_026477 NA non-coding downstream 1051328 32325134 ~ 32337695 (-)
XLOC_026509 CU695077.1 non-coding upstream 286285 33681518 ~ 33690754 (-)
XLOC_026511 NA non-coding upstream 523333 33918566 ~ 33919195 (-)
XLOC_026513 BX510335.1 non-coding upstream 553436 33948669 ~ 33948788 (-)
XLOC_026529 BX649502.7 non-coding upstream 627932 34023165 ~ 34023613 (-)

Expression


Co-expression Network