G756739


Basic Information

Item Value
gene id G756739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84929495 ~ 84931607 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU859617
TTTTTTCCCCagcaacatattttttttttaaaattccaGTTCTTTATCAACAAATAGAAAACAGACTGCGTATACAACAGATGAAACCCCTACAGCACTAAGCATTCACAAGGTATAAATGAACATTGTGGTTTATTCCAGCCAGCATGTCAGACTCAGTCCTGTTAGGCTTTGGGGATCGTCGTGCCCTGCGGCCTTGTGGGTAAAGATGTGCTTGTGTGGCGTGGTGGCGGTTGGCCCGACGGAGGCTGGGGAGGCTGGGGAGTGGTACTCAGTTGGGGTTATGCTGTTCTCTTTAACAGAACTACACATCtacacctctctcactctctttaacAGAACGATAACCTGCTCTCTATCTTTCAGCAAGGTTTAGGGTCAAGTCCAGTTTCAATGAAGTCGATTACAGCTAAATGAATCGAATTACAACTAAATGAACGAATTTCGATTCATGAATTGAATTCACTCCCTGAAAAATGACTGGATTGAAAAATGGAACACTGATCTCAACTCTGTCTGGCTGTCAGGTTGCTATGGTAATCCAGTAGATACAGACACtaactctctctctctttccctttctctctttaatTTCCTCTAAGCTGGTAAGTAAAGAGAGTGAATTATTTTAACAATATAGTTTGAAGCTGCAGTATATATCTATGTATAattgtacatatatatatatatatatataatcaatcagaattatatatatatagtcatcATTTCTATTTCTGTATAAAATAATAGCAGGTCGGTTGGAGGGTGCAGAGggtttgtgtgtctctgtcccaCCGGTAGTAATTGTAGTATTCTGTACAGGGGGGCCAGGGTTAATGGCTGCTACTcctctctccaccaccaccacggggAGCTGCTCCTGCAGTCCCTATGTTCCAACCCCCAGGCAGCGGACTGACCAATCAGCTCGCTGGGAACCCAAGGAAAGAGGAGGGGCTTAGAGGGGACACAATATGATTCATACAGAGATTCAAGGAGTTGATTCTCAAGTTCAACTCCTCGTTGGGTATAAAAGTCTGTTCGTCCGTTCGTCTCCCAGATTCATTCTCTGGTTATTGAAGGCCTCAATGCCTTCAAGGCTTCTCTCTGTTGTTGAAATCGTCATGTGCTCTTTGAGTTTCTGTACAATGCTGATTTAGTTGTCGTTAGTTGATGTCACGTTTTTTCGCTAGCTAGTGTGGTTTATATAGTACCTGTATCGCGGCGGTTGGTGTATGCGTCTGAATAATTTtgtcattccccccccccctacgTTTTAAAAAGAAACAGCAAAGTGAGAAGGCGTATTATCTTAGTTAATCTTGCTCCGTTTTAAAACGAAAaagacaacaaacaaaaaaaatagataataaacaataaaaatctTGGTAAAAGTCAAAACTGTCAGCAGCTTCAGAGAACAAACAGTGGCTCTTCTGTATTAACGTCTAGGAAATAGAAAATACAGGTCCCTAAAATAACACACAACATTTTTTAATATCTTTTTTTACTAAAATAAACATACCAATTAAAGGTGGAAAAACTAAAATGCTGTGCCCCAGTTAGGCCATTAAGACAAAATACATGTCTGATGGTATtaaaacaattatatatataaaacaaaaaaaaaatgattaaCTAAATAATAATAAGAACATTATTCATAATAATAAAGTAAGAAAGGAGAACAGAAACTCAGTCAGAACTGTCGCTTGCTCCCATATGAAACGCCGTCGTCGTCATGGTATTGTTTGTGGTTTGTTTTGTAAAGCAATCtttagggtgttttttttttttttttgtgtgtttttttgttttgttgtaaaTCCGAGTAGTAGACCTCTGGGATTGGTTGAACCCGTCGCTAGGTGACAGTGgcatctccctcctcccctgtgatAGGGTAGCAATGGCAGGGTCAGGTCAGATGGGTTGATACAAGTACGGTGGCTGAGATGGGACACTCAGTGGCCATGCCAGAGGCTGCTCAGCTCAGAGTGGTTACGTTGCATAGTGGTCAAAACTCCCCAGGTACTCCAAAGCTGCTCTGTAGCACAGCTGATACTgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU859617 True 2071 lncRNA 0.40 3 84929495 84931607

Neighbor

gene id symbol gene type direction distance location
LOC118965567 NA coding downstream 431805 84496434 ~ 84497690 (-)
LOC118965621 NA coding downstream 891159 84036777 ~ 84038336 (-)
LOC118965640 NA coding downstream 924966 84003317 ~ 84004529 (-)
cdcp2 cdcp2 coding downstream 970712 83954240 ~ 83958783 (-)
tmem59 tmem59 coding downstream 978705 83934563 ~ 83960923 (-)
gorasp1a LOC106569800 coding upstream 215301 85146908 ~ 85156401 (-)
LOC110530840 LOC106569802 coding upstream 232178 85163785 ~ 85201362 (-)
LOC118965570 LOC106569806 coding upstream 316743 85248350 ~ 85267794 (-)
LOC118965571 LOC106569806 coding upstream 343134 85274741 ~ 85294926 (-)
slc22a13a LOC106569806 coding upstream 369426 85301033 ~ 85323453 (-)
G756862 LOC101471578 non-coding downstream 300 84924266 ~ 84929195 (-)
G756855 NA non-coding downstream 12072 84916837 ~ 84917423 (-)
G756851 NA non-coding downstream 17634 84910342 ~ 84911861 (-)
G756832 NA non-coding downstream 50869 84878092 ~ 84878626 (-)
G756812 LOC106569653 non-coding downstream 108617 84820557 ~ 84820878 (-)
G756865 NA non-coding upstream 6220 84937827 ~ 84938174 (-)
G756866 NA non-coding upstream 6635 84938242 ~ 84938454 (-)
G756869 NA non-coding upstream 11795 84943402 ~ 84943732 (-)
G756880 NA non-coding upstream 29925 84961532 ~ 84963451 (-)
G756887 NA non-coding upstream 37664 84969271 ~ 84969903 (-)
G756727 NA other downstream 281271 84647464 ~ 84648224 (-)
G756592 NA other downstream 513695 84414487 ~ 84415800 (-)
G755959 NA other downstream 631960 84297165 ~ 84297535 (-)
ccl25a ccl21 other downstream 1130312 83721046 ~ 83799203 (-)
G755142 NA other downstream 1548522 83378942 ~ 83380973 (-)
G757086 NA other upstream 471011 85402618 ~ 85404005 (-)
G756981 NA other upstream 481824 85413431 ~ 85414702 (-)
G757292 LOC106569817 other upstream 771523 85703130 ~ 85756434 (-)
G757422 NA other upstream 931404 85863011 ~ 85863887 (-)
G757788 NA other upstream 1298767 86230374 ~ 86308150 (-)

Expression

G756739 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
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G756739 Expression in each Bioproject

Bar chart with 15 bars.
G756739 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G115624 NA non-coding NC_053122.1 CM020919.1 17965813 ~ 17967692 (-)