G756314


Basic Information

Item Value
gene id G756314
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84961547 ~ 84963467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU859093
cctgtcgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgcctcctccacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctacctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccacta
>TU859094
cctgtcgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgcctcctccacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctacctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccacta
>TU859095
ctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcccctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctactctgccgcctctacactctaaccactaggctacctgccgcctctacactctaaccactaggctactctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcccctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcccctacactctaaccactaggctaccctgccgcccctacactctaaccactaggctactctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgcctcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgcctcctccacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgtcgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctacctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccactaggctaccctgccgcctctacactctaaccacta

Function

NR:

description
PREDICTED: circumsporozoite protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU859093 False 422 lncRNA 0.56 2 84961547 84963467
TU859094 False 389 lncRNA 0.56 2 84961547 84963467
TU859095 True 915 lncRNA 0.57 2 84961937 84963467

Neighbor

gene id symbol gene type direction distance location
LOC110492646 LOC105022906 coding upstream 29903 84436488 ~ 84931644 (+)
LOC118965568 NA coding upstream 156975 84801273 ~ 84804572 (+)
tceanc2 tceanc2 coding upstream 1008814 83950870 ~ 83952733 (+)
lrrc42 lrrc42 coding upstream 1042640 83913983 ~ 83918907 (+)
LOC110530814 LOC106569707 coding upstream 1058266 83895686 ~ 83905612 (+)
LOC110531029 LOC106569826 coding downstream 2759 84966226 ~ 84970196 (+)
capsla capsl coding downstream 10130 84973597 ~ 84978102 (+)
LOC110531035 LOC106569797 coding downstream 38930 85002397 ~ 85107517 (+)
LOC110530843 LOC106569799 coding downstream 161091 85124558 ~ 85144377 (+)
xirp1 LOC106569803 coding downstream 245141 85208608 ~ 85234446 (+)
G756305 NA non-coding upstream 12007 84949319 ~ 84949540 (+)
G756301 NA non-coding upstream 22752 84938501 ~ 84938795 (+)
G756300 NA non-coding upstream 23063 84938205 ~ 84938484 (+)
G756299 NA non-coding upstream 23439 84937832 ~ 84938108 (+)
G756298 NA non-coding upstream 23803 84936066 ~ 84937744 (+)
G756329 NA non-coding downstream 41249 85004716 ~ 85004916 (+)
G756348 NA non-coding downstream 81912 85045379 ~ 85045702 (+)
G756352 NA non-coding downstream 90324 85053791 ~ 85054430 (+)
G756372 NA non-coding downstream 152068 85115535 ~ 85131519 (+)
G756388 LOC106569802 non-coding downstream 200146 85163613 ~ 85165864 (+)
G756271 NA other upstream 83468 84876994 ~ 84878079 (+)
G756134 NA other upstream 399656 84558786 ~ 84561891 (+)
G755602 NA other upstream 653273 84303470 ~ 84308274 (+)
G755585 NA other upstream 698581 84261987 ~ 84262966 (+)
LOC118965572 NA other downstream 293315 85256782 ~ 85264093 (+)
G757472 NA other downstream 988501 85951968 ~ 86028274 (+)
G757663 NA other downstream 1154196 86117663 ~ 86117948 (+)
G757754 NA other downstream 1266884 86230351 ~ 86231459 (+)
G757902 NA other downstream 1567686 86531153 ~ 86532379 (+)

Expression


Co-expression Network