G756389


Basic Information

Item Value
gene id G756389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85168772 ~ 85172233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU859176
CACACACCAACCACCCACAGACCCCCCCACACACCAACCACCCACAGACCCCCCCCATACCCAAACTACTCCAACAACGAGTATACAgcagaggaggctgctgagggcaggacagctcatccataatgactggaatggagccAGTGGAATGGgaacctggaaaccatggaaaccatgtgtttgatgtatttgatacaattCCACTGACTCTGCTCCAACTATTACCACGATGCCTGTGGTATATATTATCAGTTCTCTATGACTGACCAGCTGCTATGTCTGACCAGTAGTATGGAGCTGCTGTGTCTGACCAATAGTATGGAGCTGCTATGACTGACCAGTAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAGTAGTATGGAGCTGCTATGTCTGACCAGTAGTATGGAGCTGCTGTGTCTGACCAATAGTATGGAGCTGCTATGACTGACCAGTAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAGTAGTATGGAGCTGCTATGACTGACCAGTAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAGTAGTATGGAGCTGCTGTGTCTGACCAATAGTATGGAGCTGCTATGACTGACCAGTAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAGTAGTATGGGGCTGCTGTGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGTCTGACCAGTACTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGACTGACCAGTAGTATGGAGCTGCTATGTCTGACCAATAGTATGGAGCTGCTATGACTGCTGTTCTTCCTCCATTTCAATGTTAAAGGCATAGTTAATTTGaattacaaaatgacatattggtttccttaccttgTAACCAgtttatggacaaggtatgacagcaatccatggtttggttttgtttacctgaCCACTGTTTCAAATGGTAACGTTTTTTTgttgcatttgtggcacaaatccaatgcaagtcaatggtaccTATATTAACATTTTCATGGTTTCATGTCAAAATCATCCTGGACTTAATttcaaattatatttaaaaaaaaataatgttggaAGAAAGCTAATCTCATCTGTTTTCTAACAACATAAAgattcagaacaatctgagatggtgggtggaATGACCCATATTCTTGAGGTGGAATgacccacatacagtacatgacgTTTAAGTTACTGTAAGAttagacggcctatagggaggaggtcagagacctggccgggtggtgtcagaataacaacctatccctcaacgtgatcaagagatgattgtggactacaggaaaaggaggactgagcacgtccccattatcatcgactgggctgtagtggagcaggttgagagcttcaagttcctaggtgtccacatcaccaacaaactatcatgggtcaaacacaccaagacagttgtgaagagggcacgacaaagcctattcccctcaggagactgaaaagatttggcatgggtccccagatcctcaaagttctacagctgcaccatcgagagcatcctgacaggttgcatcactgcctggtatgtcaactgctcggcctccgactgcaaggcgctacagagggtagtgcttacggcccagtacatcactggggccaagcttcctgacatccaggacctctataccaggcggtgtcagaggaaggccctaaaagtcaaagactccagccaccctagtcatagagcaccaagtctaggtccaagaggctcgttaacagcttctagccccaagccataagacttgtgaacagctaaccaaatgccccccccccccgcgcatttttaagctgctgctactctctgtttattatctatgcatagtcaccttacctctacctacatgtacatattacctcaattacctcggctaacctgtacccccgcacattgactatgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccggtacccactgtatatagcctccacattgactctgtaccagtaccccctgtagatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactcagtaccgtaataccctgtatagatcctcgttactgttattttattgtcgctctttaactattattattattattttttcattttatttattgtttacttcagtttatttagtaaatactttcttaacacttattttttcttaactgcattgttggtcaggggctcgtaagtaagcatttcactctaaaatatacacctgttgtaatcggcgcatgtgacaattaacatttgatttgattatttgattttgattttaatTTAAGCCAATGGGATGCAAGAAACTATAACCAGAATGGTCAGTTTGCACTCGACTGGGACAAACACAGGACAGCATGCTTTTTATTTCAGGGGTAGGCTTAATCTGGTTCACTAGTCGATTAGAAGTCTAGAATACTTActctctgtctgagtgtctcCAGCCTCTCCTCCCTCAGTCTATCTCTGAGTCTCTCCCTGCGCCTCCTTCGTCTCTCCTGGGTGTGCTCTGCCAGTGTGTACCTCCGGAGGGCGCTGTGCTTCCTCACCATGCCCAGGGTGGCACCGCCGCGCCTCGGAACGCTGGTGAAACCCTGGCAACGCTGGAACAGGAACACCGTCACCTGGTTGAAGACAACGCTGTTGCTATGGCCGCTGTTGTCATGGGAAAGTTTTGGGCTCTTCAGGATGGAGCGGACTGTTggtggacgaggaggaggaggaggaggaggaaacaggGTTTAGAGTCACGACAAGAAGTTGGTGTATTCTATGCCTTTGTCAATGTCAGCTTATTAGAGCTACTGCATATCAGTTCTGAATGTAGCGTTTTgatgtctctcttgtcgtgatgtgtgttttgtcctatatatatatatatatatatatatatttagttttttttaattgtatttttaatcccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU859176 True 3395 lncRNA 0.45 2 85168772 85172233

Neighbor

gene id symbol gene type direction distance location
LOC110530843 LOC106569799 coding upstream 24395 85124558 ~ 85144377 (+)
LOC110531035 LOC106569797 coding upstream 61255 85002397 ~ 85107517 (+)
capsla capsl coding upstream 190670 84973597 ~ 84978102 (+)
LOC110531029 LOC106569826 coding upstream 198576 84966226 ~ 84970196 (+)
LOC118965569 NA coding upstream 203774 84942974 ~ 84964998 (+)
xirp1 LOC106569803 coding downstream 36375 85208608 ~ 85234446 (+)
LOC118965572 NA coding downstream 84793 85256782 ~ 85264093 (+)
LOC118965573 NA coding downstream 116546 85288779 ~ 85290009 (+)
LOC118965574 NA coding downstream 143676 85315909 ~ 85317139 (+)
LOC110530835 LOC106569808 coding downstream 192500 85364733 ~ 85410339 (+)
G756388 LOC106569802 non-coding upstream 2908 85163613 ~ 85165864 (+)
G756372 NA non-coding upstream 37253 85115535 ~ 85131519 (+)
G756352 NA non-coding upstream 114342 85053791 ~ 85054430 (+)
G756348 NA non-coding upstream 123070 85045379 ~ 85045702 (+)
G756329 NA non-coding upstream 163856 85004716 ~ 85004916 (+)
G756391 NA non-coding downstream 1579 85173812 ~ 85174459 (+)
G756409 NA non-coding downstream 17561 85189794 ~ 85190508 (+)
G756411 NA non-coding downstream 22906 85195139 ~ 85195403 (+)
G756414 NA non-coding downstream 27849 85200082 ~ 85200317 (+)
G756416 NA non-coding downstream 31332 85203565 ~ 85203778 (+)
G756298 NA other upstream 231028 84936066 ~ 84937744 (+)
G756271 NA other upstream 290693 84876994 ~ 84878079 (+)
G756134 NA other upstream 606881 84558786 ~ 84561891 (+)
G755602 NA other upstream 860498 84303470 ~ 84308274 (+)
G755585 NA other upstream 905806 84261987 ~ 84262966 (+)
G757472 NA other downstream 779735 85951968 ~ 86028274 (+)
G757663 NA other downstream 945430 86117663 ~ 86117948 (+)
G757754 NA other downstream 1058118 86230351 ~ 86231459 (+)
G757902 NA other downstream 1358920 86531153 ~ 86532379 (+)

Expression


Co-expression Network