G756428


Basic Information

Item Value
gene id G756428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85247286 ~ 85247912 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU859249
CTGGTACACTTTGTTCAGCTGATCCGCTGGGTAGTGTCACTGATTATTCGGAAGCACAGTGCTAGGAGCTCCAGAAAGAAGGTGCTTTGTCACAGAGAAGCCTTTATGCAAGATAAATTCATGTTTAACTCCTCTGTCCCACAGTCTTTCAGCAAACATGATTCAGCATGTGTGGAAACTTTACTTTTTAAGAAGAACAGTTTAAGAAGAACAAGGAATATAACCATCCTGCACCGTTTGATCCCTAGTTATACAACGTAACAAACCCCCAATCTGAATGTTTTGCTGTGAAGTTCTTTACAAGAGTGAGATAATCCTTCCCATGCAAAGGAAAATAATTCATATAGTTCAAATCCGTGACTTAGATACTGTCGGCCCAGTgtgttgtatttttatttaactgttattttaccagctaagttgactgagaatacattctcatttacagcaaaaaacctggggaatagttacaggggacaggagaggagatgaatgagccaattttAAGTTGGGGAtaattaggtgactgtgatggtatgagggccagattgggaatttagccagcaCACCGGGGTTAACAACACTACTctaacaataagtgccatgggatctttagtgatcacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU859249 True 627 lncRNA 0.40 1 85247286 85247912

Neighbor

gene id symbol gene type direction distance location
xirp1 LOC106569803 coding upstream 12840 85208608 ~ 85234446 (+)
LOC110530843 LOC106569799 coding upstream 102909 85124558 ~ 85144377 (+)
LOC110531035 LOC106569797 coding upstream 139769 85002397 ~ 85107517 (+)
capsla capsl coding upstream 269184 84973597 ~ 84978102 (+)
LOC110531029 LOC106569826 coding upstream 277090 84966226 ~ 84970196 (+)
LOC118965572 NA coding downstream 9114 85256782 ~ 85264093 (+)
LOC118965573 NA coding downstream 40867 85288779 ~ 85290009 (+)
LOC118965574 NA coding downstream 67997 85315909 ~ 85317139 (+)
LOC110530835 LOC106569808 coding downstream 116821 85364733 ~ 85410339 (+)
LOC118965575 NA coding downstream 136993 85384905 ~ 85387277 (+)
G756427 NA non-coding upstream 696 85246304 ~ 85246590 (+)
G756426 NA non-coding upstream 4343 85242712 ~ 85242943 (+)
G756425 NA non-coding upstream 9991 85237072 ~ 85237295 (+)
G756420 NA non-coding upstream 39461 85207567 ~ 85207825 (+)
G756419 NA non-coding upstream 39883 85206992 ~ 85207403 (+)
G756429 NA non-coding downstream 88 85248000 ~ 85301797 (+)
G756440 NA non-coding downstream 77209 85325121 ~ 85325333 (+)
G756441 NA non-coding downstream 77668 85325580 ~ 85326369 (+)
G756442 NA non-coding downstream 80381 85328293 ~ 85328617 (+)
G756448 NA non-coding downstream 106118 85354030 ~ 85354275 (+)
G756298 NA other upstream 309542 84936066 ~ 84937744 (+)
G756271 NA other upstream 369207 84876994 ~ 84878079 (+)
G756134 NA other upstream 685395 84558786 ~ 84561891 (+)
G755602 NA other upstream 939012 84303470 ~ 84308274 (+)
G755585 NA other upstream 984320 84261987 ~ 84262966 (+)
G757472 NA other downstream 704056 85951968 ~ 86028274 (+)
G757663 NA other downstream 869751 86117663 ~ 86117948 (+)
G757754 NA other downstream 982439 86230351 ~ 86231459 (+)
G757902 NA other downstream 1283241 86531153 ~ 86532379 (+)

Expression


Co-expression Network