G756441


Basic Information

Item Value
gene id G756441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85325580 ~ 85326369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU859264
gcccactgttgttcattttgtatatcaacaacatttGGGATCTTATTGAAAAAGCGGGtgttcatttttatgcagatgatactgttctttattcaagtggtTGTAGTTTATCTTTCacttttgaaaatgcccaaagagcatttaacatcatacaacagaatctgtatgatttaAAGCTGGTACTAAATTCAGGTAAAACAAAAGgcatggtattttcaaatgccaggcatgttactggacatactatagagcaagttaaagtgtgtgggttgatgataaACTGAGCTTCACCgtgcatgtagagaacttgataaggaagctcaagctgagaataggtttttattaccagcataaggcttgtttttcttttgtggccaggaaggagctggcggttttagattttagtgatgttatatatatgcaggcctcaACCACTATCCTGAGAGCACCCgattcagtgtatcatgcagccctcaggttcattacaaatcaaaaacgtctaacacatcattgtgatctctacagcgctgttggctggtcgtcattgaccttgcgtaAAGCTTAAACACGgatatacactgatttataaggccatactgggtaaaatgccattttctctctgttctttttAGTCAGGTCGGTAAATAAATATAATTTACGGTCCCATTCTCCTTTGCTTCTGACAGCACCAAAAATTAcaacaggtcatggtagaaatagtttaGTTACTTAACTTCGTAGtcttggaattctctcctgaacatttcaaaatgtgatgatctagtttcgt

Function

NR:

description
RNA-directed DNA polymerase from mobile element jockey

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU859264 True 790 lncRNA 0.38 1 85325580 85326369

Neighbor

gene id symbol gene type direction distance location
LOC118965574 NA coding upstream 8441 85315909 ~ 85317139 (+)
LOC118965573 NA coding upstream 35571 85288779 ~ 85290009 (+)
LOC118965572 NA coding upstream 62181 85256782 ~ 85264093 (+)
xirp1 LOC106569803 coding upstream 91134 85208608 ~ 85234446 (+)
LOC110530843 LOC106569799 coding upstream 181203 85124558 ~ 85144377 (+)
LOC110530835 LOC106569808 coding downstream 38364 85364733 ~ 85410339 (+)
LOC118965575 NA coding downstream 58536 85384905 ~ 85387277 (+)
hhatla hhatl coding downstream 138033 85464402 ~ 85505892 (+)
klhl40a klhl40 coding downstream 185013 85511382 ~ 85525239 (+)
vipr1a LOC106569811 coding downstream 205790 85532159 ~ 85638054 (+)
G756440 NA non-coding upstream 247 85325121 ~ 85325333 (+)
G756429 NA non-coding upstream 23783 85248000 ~ 85301797 (+)
G756428 NA non-coding upstream 77668 85247286 ~ 85247912 (+)
G756427 NA non-coding upstream 78990 85246304 ~ 85246590 (+)
G756426 NA non-coding upstream 82637 85242712 ~ 85242943 (+)
G756442 NA non-coding downstream 1924 85328293 ~ 85328617 (+)
G756448 NA non-coding downstream 27661 85354030 ~ 85354275 (+)
G756454 NA non-coding downstream 33535 85359904 ~ 85360207 (+)
G756404 NA non-coding downstream 87066 85413435 ~ 85414616 (+)
G756505 NA non-coding downstream 157228 85483597 ~ 85488866 (+)
G756298 NA other upstream 387836 84936066 ~ 84937744 (+)
G756271 NA other upstream 447501 84876994 ~ 84878079 (+)
G756134 NA other upstream 763689 84558786 ~ 84561891 (+)
G755602 NA other upstream 1017306 84303470 ~ 84308274 (+)
G757472 NA other downstream 625599 85951968 ~ 86028274 (+)
G757663 NA other downstream 791294 86117663 ~ 86117948 (+)
G757754 NA other downstream 903982 86230351 ~ 86231459 (+)
G757902 NA other downstream 1204784 86531153 ~ 86532379 (+)
G758045 NA other downstream 1308415 86634784 ~ 86635460 (+)

Expression


Co-expression Network