G757235


Basic Information

Item Value
gene id G757235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85663104 ~ 85664140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU860233
GGTGTTAAACCATACCACAGCTTTCCTTCTTGTGACATTGTGAGCAAGGTGTCTGCTTGCGCTGTACACCATCACTAAATATCAACAACGTCGTTTCCTTTTGGAGAAGCAATATCAAGCTGCCACAGTGTCCAAACTGATAACCTTTGACATTCTGGGACGGTTTTCCCCAGACACAGATTTGGCCTAATCCTGGAATTAAAAAGAATCCTCAATGGAGAAAGTccactaaaatatatttttactccAGGACTAGGTTCAGGGCTGTATTCGCTTCGTAATCGTGGAAGATCTACGTTATAGCtcaattttaaaggcaatttccGCTCAaaatcggaaatgacctttaaatTTTACTGTGGATCTTCAAGCGATACGGATTGAACCCAGCTCTTAATCTGTCTGGGGAACCGATCCTTTTAAGTGCAGATTTAAAGTGAACCGCCATGGAATTCTATTCACACGGTTCTCAAGTCTTCAGTCTTTATTCCTCTTCTTCCGCACTCTCCTTCCTCCGAAGACTCATCCTCCTCACTCTCCTTCCTCCGAAGACTCATCCTCTGCTTCTTTCAACCACTGGATAAACTTCTGGAGCTGAGGAAGACAGGAAGACCTCTGTGTTTAGGCCTGGGGTCTGTACAGGACGTACAGTGCCACACACTGAGCTGTCTGCTCTTGTCATTGGTGGCTCCGGTAGAGAACCATTTTAGGATGGCCTCCTCTTCCAGGATCTCCAGCTGGTACATTTTCATCAGCACCTACAGGGAAGACAACAGACATGTTAACGTCCAACATCACAAgtcaaataaatacataaaaagaAGTAAGAAGCAGGGGGTTGGAACCGGTTTTTGGGCACAGa

Function

NR:

description
translation initiation factor eIF-2B subunit epsilon

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU860233 True 862 lncRNA 0.45 3 85663104 85664140

Neighbor

gene id symbol gene type direction distance location
LOC110530829 mul1b coding upstream 47 85658600 ~ 85663057 (+)
vipr1a LOC106569811 coding upstream 25050 85532159 ~ 85638054 (+)
LOC110530830 LOC106583328 coding upstream 44777 85617604 ~ 85618327 (+)
klhl40a klhl40 coding upstream 137865 85511382 ~ 85525239 (+)
hhatla hhatl coding upstream 157212 85464402 ~ 85505892 (+)
LOC110530827 LOC106569812 coding downstream 26380 85690520 ~ 85708770 (+)
LOC118965641 NA coding downstream 45514 85709654 ~ 85713206 (+)
LOC110530826 LOC106569812 coding downstream 74865 85739005 ~ 85760958 (+)
LOC110531032 LOC106569814 coding downstream 128860 85793000 ~ 85881217 (+)
LOC110530844 LOC105030448 coding downstream 688134 86352274 ~ 86555806 (+)
G757232 NA non-coding upstream 10550 85652177 ~ 85652554 (+)
G757226 NA non-coding upstream 15264 85647608 ~ 85647840 (+)
G757220 NA non-coding upstream 20025 85642867 ~ 85643079 (+)
G756532 NA non-coding upstream 55124 85553424 ~ 85607980 (+)
G757243 NA non-coding downstream 18204 85682344 ~ 85682589 (+)
G757354 NA non-coding downstream 135756 85799896 ~ 85800353 (+)
G757358 NA non-coding downstream 140343 85804483 ~ 85805327 (+)
G757378 NA non-coding downstream 199039 85863179 ~ 85863889 (+)
G757346 NA non-coding downstream 217559 85881699 ~ 85882385 (+)
LOC118965572 NA other upstream 399011 85256782 ~ 85264093 (+)
G756298 NA other upstream 725360 84936066 ~ 84937744 (+)
G756271 NA other upstream 785025 84876994 ~ 84878079 (+)
G756134 NA other upstream 1101213 84558786 ~ 84561891 (+)
G755602 NA other upstream 1354830 84303470 ~ 84308274 (+)
G757472 NA other downstream 287828 85951968 ~ 86028274 (+)
G757663 NA other downstream 453523 86117663 ~ 86117948 (+)
G757754 NA other downstream 566211 86230351 ~ 86231459 (+)
G757902 NA other downstream 867013 86531153 ~ 86532379 (+)
G758045 NA other downstream 970644 86634784 ~ 86635460 (+)

Expression


Co-expression Network