G757292 (LOC106569817)



Basic Information


Item Value
gene id G757292
gene name LOC106569817
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85703130 ~ 85756434 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU860297
CTTGTCAAAGTTCCGCTGCTTCTTGTCTAGGTTGGCGGCCATTGCGTTGGCTCTCTCAACGTCAATCATGaggtcctccacctctccctgcagCCTCTGCTTGGTCTTCTCCAGGGAGGCGCACTTGGAGTTGGTCGCCTCAATGGTCTCCTCAGCATCCTGCAGTCGCTGGGCCAGCTTCTCTtggcctcctccagctcctctgtgCGTTGGATGGCATCAGTTTCATACTTAGTCCTCCACTGAGCCACCTCACTGTTGGCCTTGGACATGCCGCGCTGCAGCTCTGCCTtggcctcctgctcctcctcaaaCTGCTCTCTCAGGAGGTCACAGTCATGGCGGGCAGACTGGACACCGTGGGCCAGGACCTTGTCAAAGTTACGCTGCTTCTTGTCTAGGTTGGCGGCCATGGCGTTGGCTCTCTCAACGTCAATCATGaggtcctccacctctccctgcagCCTCTGCTTGGTCTTCTCCAGGGAGGAGCACTTGGAGTTGGTCGCCTCAATGGTCTCCTCAGCGTCCTGCAGACGCTGGGCCAGCTTCTTCCTGTTTGACGACAGAGGGTGTAGGAATGTTAC
>TU860294
CCTTGAGCAGTCCCTGGACGTTCCTCAGCTGTTTCTGGGCCTCAGCCGCCTGCCTGTTGGAGTGGCTCAGCTGGATCTCCATCTCGTTCaggtctccctccatcttcttcttcaccCTCAGGGCGTCATTCCTGCTCCTGACCTCAGAGTCCAGGGTGCTCTGCATGGAGTCAACCATCCTCTGGCTGCTCCTCTTGATCTGCTCCATCTCCTCTGGCTGTTCCTCTTGATCTGCTCCATCTCCTCGTCCTTCTCAGCCAGCTTCCTGTCCACCTCACCCTTGATTTGGTTCAGCTCCAGCTGCACACGCAGAATCTTGGATTCCTCGTGCTCCAGTGTTGCTCAGCCTCCTCCAGAGCGGTCTGGATCTCAGACTTCTCTGTCTCCACGGTCTTCTTGGCCTTCTCCAACTCATGGATGCTCTTGCTCGTCTCTCCGATCTGCTCAGTCAGGTCAGAGATCTCct

Function


NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU860297 False 587 TUCP 0.58 3 85703130 85755238
TU860294 True 466 lncRNA 0.56 3 85704298 85756434
Loading

Neighbor


gene id symbol gene type direction distance location
eif2b5 eif2b5 coding downstream 23259 85663079 ~ 85681039 (-)
LOC110530834 ctdspl coding downstream 242176 85418264 ~ 85462122 (-)
LOC118965576 NA coding downstream 286907 85416186 ~ 85417391 (-)
LOC110530836 LOC106569807 coding downstream 353936 85332365 ~ 85350362 (-)
slc22a13a LOC106569806 coding downstream 380845 85301033 ~ 85323453 (-)
LOC110530825 crj1a coding upstream 21960 85778394 ~ 85785672 (-)
LOC118965577 NA coding upstream 24875 85781309 ~ 85783600 (-)
LOC110530824 LOC106569815 coding upstream 151388 85907822 ~ 86049710 (-)
LOC110530823 NA coding upstream 293403 86049837 ~ 86073989 (-)
LOC118965646 NA coding upstream 423948 86180382 ~ 86186272 (-)
G757279 NA non-coding downstream 20195 85683886 ~ 85684103 (-)
G757267 NA non-coding downstream 46854 85657225 ~ 85657444 (-)
G757266 NA non-coding downstream 48164 85655873 ~ 85656134 (-)
G757265 NA non-coding downstream 51871 85652201 ~ 85652427 (-)
G757263 NA non-coding downstream 53404 85650149 ~ 85650894 (-)
G757329 NA non-coding upstream 6001 85762435 ~ 85763712 (-)
G757333 NA non-coding upstream 10077 85766511 ~ 85766711 (-)
G757410 NA non-coding upstream 126346 85882780 ~ 85883361 (-)
G757433 NA non-coding upstream 127830 85884264 ~ 85885233 (-)
G757437 NA non-coding upstream 134170 85890604 ~ 85891385 (-)
G756981 NA other downstream 289596 85413431 ~ 85414702 (-)
G757086 NA other downstream 300771 85402618 ~ 85404005 (-)
G756727 NA other downstream 1056074 84647464 ~ 84648224 (-)
G756592 NA other downstream 1288498 84414487 ~ 84415800 (-)
G755959 NA other downstream 1406763 84297165 ~ 84297535 (-)
G757422 NA other upstream 106577 85863011 ~ 85863887 (-)
G757788 NA other upstream 473940 86230374 ~ 86308150 (-)
LOC110530858 NA other upstream 2184470 87940808 ~ 87943613 (-)
G759421 NA other upstream 2674770 88430998 ~ 88443468 (-)
G759982 NA other upstream 2779206 88535640 ~ 88536047 (-)

Expression


G757292(LOC106569817) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G757292(LOC106569817) Expression in each Bioproject

Bar chart with 9 bars.
G757292(LOC106569817) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network