G758432


Basic Information

Item Value
gene id G758432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87407527 ~ 87435638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU861638
cccctctccatcttcctcatcctcctcttcctctttcctttcctcctcaACCTCCTCTTCCACATCGCTCCCTTccacctctttcccttcctcctcttccttctctttcccttcctcatcttcctcctcaacctcctctttcccttccttctcttcctcttttccttcattttcctcctcttcatcttcctcatcctcctcctcttcctccctgtatatctctgtgGTTTCCCCTGGGCTGAGGCTGGCTTCACTCCATCCCATCTGCATTGCGTGTGCCGTGTGTGTGATGTCACATATACTATGGGTATGATGTCACAGGCGTAACATGTACTACCTCTCATATGCATGTGGACTGGATGTGGGGGGTTGTGTAGGAAGCGCACCCCAACCTATCGCCATGGCTACTGTTACTACAGTTACTTGTACAATCACTCTAGTACACTTAAAaaacagagaagggagagatcaaccacttatataaacagagagagagagagagagagataaacaacttatataaacagagagagagaaatcaaccacttatataaacagagagagagagagagagagagagcgagatcaaccacttatgtaaacagagagagagagagagagagagagatagagatcaaccacttatataaacagagagagggagagagagaacaaccacttatataaacagagaaacggagagagagagagagagagatcaaccacttatataaacagagagagagagagagatgaaccacttatataaacagagagagggagagagagaacaaccacttatataaacagagagagggagagagagagagatcaaccacttctataaacagagagagagggagagagacatcaaacactcatataaacagagagagagagggatatcaaccacttatataaacagagagagagagggagatcaaccacttatataaacacagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatgaaccacttatataaacagggagagggagagagagaagaaccacttatataaacagagagagggagagagatagatcaACCACttctataaacagagagagagggagagagacatcaaacacttatataaacagagagagagagggagatcaaccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagagagatcaaacacttatataaacagagagagagagagatcaacaacttatataaacagagagagagagattaaccacttatataaacagagagagagagagagagagagagatagagatcaaccacttatatgaacagagagagagatcaaccacttatataaacagagacagagagagctcagccacttatataaacagagagagagagagagatcgaccacttatataaacagagagagagagagagagagagaaaggagatcaaccacttatataaacagagagagagagagatcaaccacttaaataaaaagagacagagagagagagagatcagccacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagggagagagagagatcaaccacttatataaacagagagagagagatcatccacttatataaacagagagagagagagagaaagattaccacttatataaacacagagagagagagaaagagatcaaccacttatataaatagagagagagatatcatccacttatataaacagagagagagagagatcaaccacttatataaacagagagagggagagagagagatatcaaccacttatataaacagagagggggagtgagagatcaaccacttatataaacagagagagagatcatccacttatataaacagagagagatcaaccacttatataaacagagagagggagagagagagagatcaaccacttatataaacagagggagcgagagatcacccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagggagatcaaccacttatataaacagagagagagagagagagagatcaaccacttatataaacagagagagagagagatcaacaacttatataaacagagagaaagacagagaaatcaaccacttatataaacaaagagagagagagagagatcaaccacttatataaacagagagagagagagagagagacatcaaacacttatataaacagagagagagaga
>TU861644
cccctctccatcttcctcatcctcctcttcctctttcctttcctcctcaACCTCCTCTTCCACATCGCTCCCTTccacctctttcccttcctcctcttccttctctttcccttcctcatcttcctcctcaacctcctctttcccttccttctcttcctcttttccttcattttcctcctcttcatcttcctcatcctcctcctcttcctccctgtatatctctgtgGTTTCCCCTGGGCTGAGGCTGGCTTCACTCCATCCCATCTGCATTGCGTGTGCCGTGTGTGTGATGTCACATATACTATGGGTATGATGTCACAGGCGTAACATGTACTACCTCTCATATGCATGTGGACTGGATGTGGGGGGTTGTGTAGGAAGCGCACCCCAACCTATCGCCATGGCTACTGTTACTACAGTTACTTGTACAATCACTCTAGTACACTTAAAaaacagagaagggagagatcaaccacttatataaacagagagagagagagagagagataaacaacttatataaacagagagagagaaatcaaccacttatataaacagagagagagagagagagagagagcgagatcaaccacttatgtaaacagagagagagagagagagagagagatagagatcaaccacttatataaacagagagagggagagagagaacaaccacttatataaacagagaaacggagagagagagagagagagatcaaccacttatataaacagagagagagagagagatgaaccacttatataaacagagagagggagagagagaacaaccacttatataaacagagagagggagagagagagagatcaaccacttctataaacagagagagagagagagagagagagagagagatcaaccacttatataagcagagagagagagagatcaaccacttatttcaacacacagagagagagagagagatcaacctcTTAAATAAacagggaaagagaaggagagagatcaaccacttatataaacagaaagagagatcaaccacttatataaacagagagagggagagagagagatcaaccacttatataaacagagggagcgagagatcacccacttatataaacagtGAGAGAGATCAAACAAttctataaacagagagagagagagagaaagatcaaccacttaaataaacagagacagagagagagagagagagagagatcaaccacttaaataaacagagagagagggagagagagatcaaccacttatataaacagagagagagatcatccactcatataaacagagagagagagagagttcaaccacttatataaacagagagagggagagagatcaaccacttatataaacagagagagagagagatcatccactcatataaacagagagagagagagatcaaccacttatataaacagagagagagagatagagatcaaccacttatataaacagagagagggagggagggagagatcaaccacttatataaacagagacagagagagagagagagagatcaaccacttatataaacagagagagagagatcaaccacttatttcaacacacagagagagagagagacggagagagagagagagagagagagagagagatcaacctcttatataaacagagggagagagagagagagagagagaccagccacTTATATGAacagggaaagagaaggagagagatcaaccacttatataaacagagagagggagagagagagatcaaccacttatataaacagagagagagagatcatccacttatataaacagagagagagagagagaaagattaccacttatataaacacagagagagagagaaagagatcaaccacttatataaacagagagagagatagagaggtcaaccacttatataaacagagagggggagtgagagatcaaccacttatatatacagagagagggagagagagatatcaaccacttatataaacagagagagggagagaggtagagatcaaccacttatataaatgcagagagagagatcaaccatttatataaacagagagagagagaggtcaaccacttatataaacagagagggggagagagagagagatcaaccatttatataaacagagagagagatcaaccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagggagagagagatcaaccacttctataaacagagagagagagagagagagctagaaagagatcaatcacttatataaacagagagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatcaaccacttatataaacagagagagagagagagagaacaaccacttatataaacagagagagggagagagagatcaaccactta
>TU861647
cccctctccatcttcctcatcctcctcttcctctttcctttcctcctcaACCTCCTCTTCCACATCGCTCCCTTccacctctttcccttcctcctcttccttctctttcccttcctcatcttcctcctcaacctcctctttcccttccttctcttcctcttttccttcattttcctcctcttcatcttcctcatcctcctcctcttcctccctgtatatctctgtgGTTTCCCCTGGGCTGAGGCTGGCTTCACTCCATCCCATCTGCATTGCGTGTGCCGTGTGTGTGATGTCACATATACTATGGGTATGATGTCACAGGCGTAACATGTACTACCTCTCATATGCATGTGGACTGGATGTGGGGGGTTGTGTAGGAAGCGCACCCCAACCTATCGCCATGGCTACTGTTACTACAGTTACTTGTACAATCACTCTAGTACACTTAAAaaacagagaagggagagatcaaccacttatataaacagagagagagagagagagagataaacaacttatataaacagagagagagaaatcaaccacttatataaacagagagagagagagagagagagagcgagatcaaccacttatgtaaacagagagagagagagagagagagagatagagatcaaccacttatataaacagagagagggagagagagaacaaccacttatataaacagagaaacggagagagagagagagagagatcaaccacttatataaacagagagagagagagagatgaaccacttatataaacagagagagggagagagagaacaaccacttatataaacagagagagggagagagagagagatcaaccacttctataaacagagagagagggagagagacatcaaacactcatataaacagagagagagagggatatcaaccacttatataaacagagagagagagggagatcaaccacttatataaacacagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatgaaccacttatataaacagggagagggagagagagaagaaccacttatataaacagagagagggagagagatagatcaACCACttctataaacagagagagagggagagagacatcaaacacttatataaacagagagagagagggagatcaaccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagagagagagagagagagagagagagagaaaggagatcaaccacttatataaacagagagagagagagatcaaccacttaaataaaaagagacagagagagagagagatcagccacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagatcaaccacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagatcaaccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagagagatcaaccacttgtataaacagagagagagagagaaagagatcaaccacttgtataaacagagagagagagagacagatcaattacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatcaaccacttgtataaacagagagagagagagagagagagagatcaaccacgtatataaacagagacacagagagagagatcaaccacttaaataaacagagagagagagagagatcaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagagagagagagctagaaagagatcaatcacttatataaacagagagagagagagagagagatcaaccacttatatatacagagagagggagagagagagatcaaccacttatataaacagagagagggagagaggtagagatcaaccacttatataaatgcagagagagagatcaaccatttatataaacagagagagagagagatcacccacttatttcaacacagagagagagagagatcaacctcttatataaacagagaaagagaaggagagatcaaccacttatataaacagaaagagagatcaacaacgtatataaacagagagagatcaactacttatataaacagagggagcgagagatcacccacttatataaacagagagagagagatcaaccacttatataaacagagagagagagagaaagagatcaaccacttatataaacagagagagagagagaggtcaaccacttatataaacagagagggggagagagagagagatcaaccatttatataaacggagagagagaacaaccaattatataaacagagagagagagagagcgagagctagaaagagatcaatcacttatataaacagagagagagagagagagatgaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagagctagaaagagatcaatcacttatataaacagagacagagagagagagagatcagccacttatataaagagagagggagagaaagagatcaaccacttatataaacagagagagagagagagagagagatcaaccatttatataaacagagagagagagagagagagagaaagcgatcaatcacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatcaaccacttatataaacagagggagagagagagagagatcaaccacttatataaacagagagagagagagagagagagatcaaccacttatataaacagagagagagagagatcaaccacttatataaacagagagggggagtgagagatcaaccacttatataaacagagagagagagagatcaaccacttatataaacagagagagggagagagagagagatcaaccacttatataaacagagggagcgagagatcacccacttatataaacagagcgagagagagatcatccacttatataaacagagagagagagagagaaagatcaaccacttatataaacagagagagagagagagaaagagatcaaccacttatataaacagagagagagag
>TU861639
caaccacttatataaacagagagagagagagagagagagacatcaaacacttatataaacagagagagagagagatcaacaacttatataaacagagagagagagattaaccacttatataaacagagagagagagagagagagagagagagagagatcaaccacttatataaacagagagagggagagagagagagatcaaccacttatataaacagagggagcgagagctcacccacttatataaacagagggagcgagagctCACCCACTTATataaacggagagagagagagatcaaccacttatataaacagagagagaaagagatcaaccacttatataaacagagagagagagagaggtcaaccacttatataaacagagagagagagagaaagagatcaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagatctaccacttatataaacagagagagagagagagagagagagatcaaccacttgtataaacagagagagagagagaaagagatcaaccacttgtataaacagagagagagagagacagatcaattacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatcaaccacttgtataaacagagagagagagagagagagagagatcaaccacgtatataaacagagacacagagagagagatcaaccacttaaataaacagagagagagagagagatcaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagagctagaaagagatcaatcacttatataaacagagacagagagagagagagatcagccacttatataaagagagagggagagaaagagatcaaccacttatatgaacagagagagagagagagagagatcaaccatttatataaacagagagagagagagagagagaaagcgatcaatcacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatcaatgacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagacagagatcaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagatctaccacttaaataaac
>TU861640
tcaataaacagagagcgagacagagagagagagagggagagatcaaccacttatataaacagagggagagttagagatcaaccacttacataaacagagagagagagagagagagagagagatcaaccacttatataaacagagagagagatatcaaccacttatataaacacagagagagagagagagatcaaccacttatataaacagagagagagagagagagagatcaatgacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagacagagatcaaccacttatataaaccgagagagagagagagaggtcaaccacttatataaacagagagggggagagagagagagatcaaccatttatataaacggagagagagaacaaccacttatataaacagagagagagagagagagcgagagctagaaagagatcaatcacttatataaacagagagagagagagagagagatcaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagatctaccacttatataaacagagagagagagagagagagatcaaccacttgtataaacagagagagagagagagaaagagatcaaccacttgtataaacagagagagagacagatcaattacttatataaacagagagagagagagagagatcaaccacttatataaacagagatagagagatcaaccacttatataaacagagagagagggagagagatcaaccacttgtataaacagagagagagagagagagagagagagagagatcaaccacgtatataaacagagacacagagagagagatcaaccacttaaataaacagagagagagagagagatcaaccacttatataaacagagagagggagagagagatcaaccacctctataaacagagagagagagagagagagagctagaaagagatcaatcacttatataaacagagacagagagagagagagatcagccacttatataaagagagagggagagaaagagatcaaccacttatatgaacagagagagagagagagagagatcaaccatttatataaacagagagagagagagagagagaaagcgatcaatcacttatataaacagagagagagagagagatcaaccacttatataaacagagagagagagagagagatcaaccacttatataaacagagagagagagagagatcaaccacttaaataaacagagagagagtgatcatccacttatat
>TU861642
atcaaccacttaaataaaaagagacagagagagagagagatcagccacttatataaacagagagagagagagagagatcaaccacttatataaacagagacagagagagagagagagagagagagagagatcaaccacttatataagcagagagagagagagatcaaccacttatttcaacacacagagagagagagagagatcaacctcTTAAATAAacagggaaagagaaggagagagatcaaccacttatataaacagaaagagagatcaaccacttatataaacagagagagggagagagagagatcaaccacttatataaacagagggagcgagagatcacccacttatataaacagtGAGAGAGATCAAACAAttctataaacagagagagagagagagaaagatcaaccacttaaataaacagagacagagagagagagagagagagagatcaaccacttaaataaacagagagagagggagagagagatcaaccacttatataaacagagagagagatcatccactcatataaacagagagagagagagagttcaaccacttatataaacagagagagggagagagatcaaccacttatataaacagagagagagagagatcatccactcatataaacagagagagagagagatcaaccacttatataaacagagagagagagatagagatcaaccacttatataaacagagagagggagggagggagagatcaaccacttatataaacagagacagagagagagagagagagatcaaccacttatttcaacacacagagagagagagagacggagagagagagagagagagagagagagagatcaacctcttatataaacagagggagagagagagagagagagagaccagccacTTATATGAacagggaaagagaaggagagagatcaaccacttatataaacagagagagggagagagagagatcaaccacttatataaacagagagagagagatcatccacttatataaacagagagagagagagagaaagattaccacttatataaacacagagagagagagaaagagatcaaccacttatataaacagagagagagatagagaggtcaaccacttatataaacagagagggggagtgagagatcaaccacttatatatacagagagagggagagagagatatcaaccacttatataaacagagagagggagagaggtagagatcaaccacttatataaatgcagagagagagatcaaccatttatataaacagagagagagagagagatcacccacttatttcaacacagagagagagagagatcacccaCTTATTTCAACACagagagagagagagatcaacctcttatataaacagagaaagagaaggagagatcaaccacttatataaacagagagagatcaactacttatataaacagagggagcgagagatcacccacttatataaacagagagagagagatcatccacttatgtaaacagagagagatagagagaaagatcaaccacttatataaacagagagagagagagaaagagatcagccacttatataaacacagagtgagagagaggtcaaccacttatataaacagagagggggagtgagagatcaaccacttatataaacagagagagagagagatcaaccacttatataaacagagagagggagagagagagagagctcacccacttatataaacagagagagagagagatcaaccacttatataaacagagagagagagagagagatcaaccacttgtataaacagagagagagagagagagagagatcaaccacgtatataaacagagacagagagagagagagagagatcaaccacttaaataaacagagagagagtgatcatccacttatataaacagagagagagggagagagagagagatcaaccacttatataaacagagacagagagagagagagagatcaaccacttatatatacagagagagagagagagagatcaaccacttatataaacagagagagagagagagatcaaccacttatataaacagagagagggagagagagatcaaccacgtatataaacagagatagagagagagagagagagagagagatcaaccacttaaataaacagagagagagtgatcatccacttatataaacagagagagagagatcaactacttatgtaaacagagagagagagagagagatcaaccacttatatatacagagagagggagagagagatcaaccacttatataaacagagtgggagagagggagagatcaaccacttatataaatgCAGAGAGATCGATCAACcatttatataaacagagagagagagagatcacccacttatttcaacacagagagagagagagatcaacctcttatataaacagagaaagagaaggagagatcaaccacttatataaacagaaagagagatcaatcacttatataaacagagagagatcaaccacttatataaccagagggagcgagagatcacccacttatataaacagagagagagagatcatccacttatataaacagagagagagagagagaaagatcaaccacttatataaacagagagagagagagaaagagatcaaccacttatataaacagagagagagagag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612438

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU861638 False 2394 lncRNA 0.40 3 87407527 87412837
TU861644 False 2437 lncRNA 0.41 4 87407527 87434306
TU861647 False 3259 lncRNA 0.40 8 87407527 87435638
TU861639 False 1286 lncRNA 0.39 5 87408953 87424989
TU861640 False 1321 lncRNA 0.39 5 87410058 87426400
TU861642 True 2694 lncRNA 0.39 7 87416136 87432764

Neighbor

gene id symbol gene type direction distance location
LOC110530822 LOC106596771 coding upstream 1082 87003179 ~ 87406445 (+)
ly97.3 LOC106596797 coding upstream 487014 86912176 ~ 86920513 (+)
LOC110530851 LOC106569794 coding upstream 779625 86591510 ~ 86629379 (+)
LOC110504868 LOC106569793 coding upstream 823789 86569700 ~ 86583738 (+)
LOC110530844 LOC105030448 coding upstream 851721 86352274 ~ 86555806 (+)
LOC110519501 LOC106569361 coding downstream 97312 87532950 ~ 87549838 (+)
LOC110512128 LOC106596732 coding downstream 133434 87569072 ~ 87671104 (+)
LOC110512127 LOC106591122 coding downstream 252293 87687931 ~ 87691743 (+)
LOC110513441 apcdd1 coding downstream 310154 87745792 ~ 87775447 (+)
acss2l LOC106596660 coding downstream 581582 88017220 ~ 88059703 (+)
G758410 NA non-coding upstream 56773 87350026 ~ 87350754 (+)
G758350 NA non-coding upstream 237149 87168953 ~ 87170378 (+)
G758326 NA non-coding upstream 317600 87088568 ~ 87089927 (+)
G758311 NA non-coding upstream 360878 87046371 ~ 87046649 (+)
G758267 NA non-coding upstream 459280 86947771 ~ 86948247 (+)
G758482 NA non-coding downstream 105589 87541227 ~ 87541539 (+)
G758486 NA non-coding downstream 111873 87547511 ~ 87547931 (+)
G758512 NA non-coding downstream 187691 87623329 ~ 87633544 (+)
G758513 NA non-coding downstream 198106 87633744 ~ 87634980 (+)
G758520 NA non-coding downstream 203898 87639536 ~ 87640417 (+)
G758259 LOC106569763 other upstream 473516 86933446 ~ 86934011 (+)
G758045 NA other upstream 772067 86634784 ~ 86635460 (+)
G757902 NA other upstream 875148 86531153 ~ 86532379 (+)
G757754 NA other upstream 1176068 86230351 ~ 86231459 (+)
G758531 NA other downstream 281179 87716817 ~ 87717718 (+)
G758866 NA other downstream 296656 87732294 ~ 87733139 (+)
G758892 NA other downstream 439482 87875120 ~ 87876684 (+)
G758976 ankrd12 other downstream 530054 87959523 ~ 87971929 (+)
G758988 NA other downstream 556332 87991970 ~ 87995145 (+)

Expression


Co-expression Network