G758877


Basic Information

Item Value
gene id G758877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87771001 ~ 87771761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862237
gcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgcctaagcaggaactaatggggaaccataataaaccccagaaagagaagctgctgccttggcaggaactaatggggatccataataaaccccaggaaaagtagctgctgccttggcaggaactaatggggatctataataaaccccaggaagagtagctgctgccttgacaggaactaatggggatccataataacccccaggaagagtagctgctgccttgacagg

Function

NR:

description
uncharacterized protein LOC100142646

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862237 True 329 lncRNA 0.49 2 87771001 87771761

Neighbor

gene id symbol gene type direction distance location
LOC110512127 LOC106591122 coding upstream 79258 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 99897 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 221163 87532950 ~ 87549838 (+)
LOC110530822 LOC106596771 coding upstream 364556 87003179 ~ 87406445 (+)
ly97.3 LOC106596797 coding upstream 850488 86912176 ~ 86920513 (+)
acss2l LOC106596660 coding downstream 245459 88017220 ~ 88059703 (+)
LOC110510807 LOC106569716 coding downstream 853680 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 874639 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 1115073 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 1302863 89074624 ~ 89139486 (+)
G758863 NA non-coding upstream 43156 87727425 ~ 87727845 (+)
G758860 NA non-coding upstream 45187 87724669 ~ 87725814 (+)
G758495 NA non-coding upstream 86796 87679349 ~ 87684205 (+)
G758520 NA non-coding upstream 130584 87639536 ~ 87640417 (+)
G758886 NA non-coding downstream 21236 87792997 ~ 87796407 (+)
G758908 NA non-coding downstream 61993 87833754 ~ 87834480 (+)
G758909 NA non-coding downstream 65309 87837070 ~ 87837843 (+)
G758891 ralbp1 non-coding downstream 75172 87846933 ~ 87866192 (+)
G758915 NA non-coding downstream 79843 87851604 ~ 87907201 (+)
G758866 NA other upstream 37862 87732294 ~ 87733139 (+)
G758531 NA other upstream 53283 87716817 ~ 87717718 (+)
G758259 LOC106569763 other upstream 836990 86933446 ~ 86934011 (+)
G758045 NA other upstream 1135541 86634784 ~ 86635460 (+)
G758892 NA other downstream 103359 87875120 ~ 87876684 (+)
G758976 ankrd12 other downstream 193931 87959523 ~ 87971929 (+)
G758988 NA other downstream 220209 87991970 ~ 87995145 (+)
G759020 LOC106569827 other downstream 310260 88082021 ~ 88106947 (+)
G759031 LOC106569827 other downstream 337245 88109006 ~ 88110300 (+)

Expression


Co-expression Network