G758926


Basic Information

Item Value
gene id G758926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87885202 ~ 87887096 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862320
GGACTATTAGACAtaggaacagaggaggactatTAGACGTAGGAAACAGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACATAGGAACAGAGGAGGATTATTAGACGTAGGAAACAAAGGAGGACTATTAGACGTAGAAACAGAGGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACGTAGGAAACAGAGGACTATTAGACAtaggaacagaggaggactattagacgtaggaacagaggaggactatTAGACGTAGGAACAGAGGACTATTAGACGtaggaacagaggaggactatTAGACGTAGAAACAGAGGAGGACTATTAGACGTAGGAAACAGAGGACTATTAGACGtaggaacagaggaggactattagacgtaggaacagaggaggactatTAGACATAGGAACAGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACGAAGGAAACAGAGGACTATTAGACAtaggaacagaggaggactattagacgtaggaacagaggaggactatTAGACGTAGGAAACAgaggactattagacgtaggaacagaggaggactattagacgtaggaacaGAGGACTATTAGACGTAGAAACAGAGGAGGACTATTAGACGTAGAAACAGAGGAGGACTATTAGACGAAGGAAGGAGGACTATTAGACGAAGGAACAGAGGACTATTAGACATAGGCAGCTGAAGGATGGTTGAAGGATGGTTCCGCCATTCGACCAGTTCAGGACCA
>TU862322
GGACTATTAGACAtaggaacagaggaggactatTAGACGTAGGAAACAGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACAtaggaacagaggaggactattagacgtaggaacagaggaggactattagacgtaggaacaGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACAtaggaacagaggaggactattagacgtaggaacagaggaggactatTAGACGTAGGAACAGAGGACTATTAGACGtaggaacagaggaggactatTAGACGTAGAAACAGAGGAGGACTATTAGACGTAGGAAACAGAGGACTATTAGACGtaggaacagaggaggactattagacgtaggaacagaggaggactatTAGACATAGGAACAGAGGACTATTAGACGTAGAAACAGAGGACTATTAGACGAAGGAAACAGAGGACTATTAGACAtaggaacagaggaggactattagacgtaggaacagaggaggactatTAGACGTAGGAAACAgaggactattagacgtaggaacagaggaggactattagacgtaggaacagaggaggactattagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862320 False 786 lncRNA 0.43 7 87885202 87887096
TU862322 True 607 lncRNA 0.43 5 87885202 87886690

Neighbor

gene id symbol gene type direction distance location
LOC110513441 apcdd1 coding upstream 109755 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 193459 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 214098 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 335364 87532950 ~ 87549838 (+)
LOC110530822 LOC106596771 coding upstream 478757 87003179 ~ 87406445 (+)
acss2l LOC106596660 coding downstream 130124 88017220 ~ 88059703 (+)
LOC110510807 LOC106569716 coding downstream 738345 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 759304 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 999738 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 1187528 89074624 ~ 89139486 (+)
G758925 NA non-coding upstream 6417 87877943 ~ 87878785 (+)
G758891 ralbp1 non-coding upstream 19010 87846933 ~ 87866192 (+)
G758909 NA non-coding upstream 47359 87837070 ~ 87837843 (+)
G758908 NA non-coding upstream 50722 87833754 ~ 87834480 (+)
G758886 NA non-coding upstream 88795 87792997 ~ 87796407 (+)
G758935 NA non-coding downstream 19681 87906777 ~ 87907653 (+)
G758961 NA non-coding downstream 38667 87925763 ~ 87927785 (+)
G758962 NA non-coding downstream 41231 87928327 ~ 87933847 (+)
G758965 NA non-coding downstream 50095 87937191 ~ 87982296 (+)
G758967 NA non-coding downstream 53023 87940119 ~ 87940447 (+)
G758892 NA other upstream 8518 87875120 ~ 87876684 (+)
G758866 NA other upstream 152063 87732294 ~ 87733139 (+)
G758531 NA other upstream 167484 87716817 ~ 87717718 (+)
G758259 LOC106569763 other upstream 951191 86933446 ~ 86934011 (+)
ly97.3 LOC106596797 other upstream 964693 86912176 ~ 86920513 (+)
G758976 ankrd12 other downstream 78596 87959523 ~ 87971929 (+)
G758988 NA other downstream 104874 87991970 ~ 87995145 (+)
G759020 LOC106569827 other downstream 194925 88082021 ~ 88106947 (+)
G759031 LOC106569827 other downstream 221910 88109006 ~ 88110300 (+)
G759556 NA other downstream 810878 88697974 ~ 88701419 (+)

Expression


Co-expression Network