G758961


Basic Information

Item Value
gene id G758961
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87925763 ~ 87927785 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862369
gctgtaacgtaacaaaatgtggaaaaagtcaaggggtctgaatactttccgaatgcactctatgAGGGAGTAATTCACTAAATACTTCATATGTAGTAGTACTTATCACTAGGGTAGAGGGGAATACTTCATATGTAGTAGTACTTATCACTAGGTTAGAGGGGAATACTTCATATGTAGTAGTACTTAACACTAGGGTAGAGGGGAATACTTCATATGACAATAATCTTCATGATGTCTACATCTTAAAGACATGCAGACATGTAGACATcttaaagacatgtagacatcttaaagacatgtagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862369 True 307 lncRNA 0.36 3 87925763 87927785

Neighbor

gene id symbol gene type direction distance location
LOC110513441 apcdd1 coding upstream 150316 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 234020 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 254659 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 375925 87532950 ~ 87549838 (+)
LOC110530822 LOC106596771 coding upstream 519318 87003179 ~ 87406445 (+)
acss2l LOC106596660 coding downstream 89435 88017220 ~ 88059703 (+)
LOC110510807 LOC106569716 coding downstream 697656 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 718615 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 959049 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 1146839 89074624 ~ 89139486 (+)
G758935 NA non-coding upstream 18110 87906777 ~ 87907653 (+)
G758915 NA non-coding upstream 18562 87851604 ~ 87907201 (+)
G758926 NA non-coding upstream 38667 87885202 ~ 87887096 (+)
G758925 NA non-coding upstream 46978 87877943 ~ 87878785 (+)
G758891 ralbp1 non-coding upstream 59571 87846933 ~ 87866192 (+)
G758962 NA non-coding downstream 542 87928327 ~ 87933847 (+)
G758965 NA non-coding downstream 9406 87937191 ~ 87982296 (+)
G758967 NA non-coding downstream 12334 87940119 ~ 87940447 (+)
G758968 NA non-coding downstream 13125 87940910 ~ 87942461 (+)
G758969 NA non-coding downstream 15338 87943123 ~ 87944229 (+)
G758892 NA other upstream 49079 87875120 ~ 87876684 (+)
G758866 NA other upstream 192624 87732294 ~ 87733139 (+)
G758531 NA other upstream 208045 87716817 ~ 87717718 (+)
G758259 LOC106569763 other upstream 991752 86933446 ~ 86934011 (+)
ly97.3 LOC106596797 other upstream 1005254 86912176 ~ 86920513 (+)
G758976 ankrd12 other downstream 37907 87959523 ~ 87971929 (+)
G758988 NA other downstream 64185 87991970 ~ 87995145 (+)
G759020 LOC106569827 other downstream 154236 88082021 ~ 88106947 (+)
G759031 LOC106569827 other downstream 181221 88109006 ~ 88110300 (+)
G759556 NA other downstream 770189 88697974 ~ 88701419 (+)

Expression


Co-expression Network