G758968



Basic Information


Item Value
gene id G758968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87940910 ~ 87942461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU862379
TCGTTGAAAAGGCAATATgttgaaaaaatagtttttttgttgttgtgatctCACATCGAAACTGTAAAAGTTTagcttttttttctccatctATTTCTATAGAAGAATTTTGCCACAACAAAATGGTTATTCTTTTAATGTGTGCGACACACCACCTAAAAAGAACAACACACAGGAGGTTGAGGAACTGTACAGTGATGTGTCCAAAACagtaccctagtccctatatagtttAGACCAGGGCCCGCATAGTTCACTACAACtgaatatttttattattttttttaaatgagtacCACTTCAGCGCTGTGGCGACACTAGACCCCAACGGCACCCAGACTGCTCAAATCATAGGCCTAACAAATCCGATTTTAGCCTAACAATGATGTTGGATGCCTCAAGAGGAATTGTAGGCGATAGCCAGCTATGGGTACTTGGTAATTAGCTGTTTTTCTTTCACTAGCCAActagaaatacatttaaaatgtacaaaatcaggGCTTTCTGACAAGGTGGGGCTGATGTAGGACTAAGgttggggtggtggtcagtcaaCTTCCCCCTCAGGAAATTGGAGCATTTTTTGAAAAACCTGTAACTCATCTCCTGAAACCTAGTCTTAAATTATAATCAAACAAGAAGTATTGTGTTTGCTCTTAAATTAAATTGTGGTGGTCTCAATAACACATTTTTCTAGGTTCAATTTAGGGGTAATGACAGTCGTTTGGTAGTTTACAGTCTCATccctgcaactcccgtacggactcgggagaggcgaaggttgagagccgtgcgtcctccgaaacacaaccaagccgcaccGCTTCTTGGCACaacgcccacttaacccggaagccaaaccgcaccaatgtgtcggaggaaacgccgtacacctggcgaccgtgtcagcgtgcactgcgcccggtctGCCAGAGGAgccgctagagcgcgatgggacaaggacatccctgcccggccaaacccctcccctaacccggacgacgctgggccaattgtgcgcagccccatgggtctcctggtcacaGCCGGCAGTGACAGTCTGGatttgaacccagaatctctggtggcacagccttaAGACCATTTACACTGCGCCACCCCAGTAACGACTATTCTAACAAATAACTGTCTTTATGTCCATAGTCACTCAAATGTAAACGGGCTTCTTCATTTTGTTTGTGGAGAAAATTCAGAATAATGAAATTACTGGATGCAATGTAGTCGTTAACATAATGCCTGCTAATGTTTAACAGTCTGACATAACTTTCTACGAAGGACGGTATCAGCGGGGAAACAGCAGCTCTCTGCCATGTCTGTTTCCATCCACACAGCGACGCGCGCTGAACTTCAGCAACACCGCACGTTCCCCTTTTCTCGTTAATGCGCTCCCGACCTACTACCATGACGGAAATCAAAATGTCCAGGCAAGAAAGTTCTCGCTTAGTTGACTAAACGCTGTAGCTAACTACCTTCGCCGTAGTGAGCCCTCAGCGAAGGAGCTAACT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU862379 True 1526 lncRNA 0.46 2 87940910 87942461

Neighbor


gene id symbol gene type direction distance location
LOC110513441 apcdd1 coding upstream 165463 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 249167 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 269806 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 391072 87532950 ~ 87549838 (+)
LOC110530822 LOC106596771 coding upstream 534465 87003179 ~ 87406445 (+)
acss2l LOC106596660 coding downstream 74759 88017220 ~ 88059703 (+)
LOC110510807 LOC106569716 coding downstream 682980 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 703939 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 944373 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 1132163 89074624 ~ 89139486 (+)
G758967 NA non-coding upstream 463 87940119 ~ 87940447 (+)
G758962 NA non-coding upstream 7063 87928327 ~ 87933847 (+)
G758961 NA non-coding upstream 13125 87925763 ~ 87927785 (+)
G758935 NA non-coding upstream 33257 87906777 ~ 87907653 (+)
G758926 NA non-coding upstream 53814 87885202 ~ 87887096 (+)
G758969 NA non-coding downstream 662 87943123 ~ 87944229 (+)
G758974 NA non-coding downstream 15445 87957906 ~ 87958399 (+)
G758976 ankrd12 non-coding downstream 17062 87959523 ~ 87971929 (+)
G758989 NA non-coding downstream 54782 87997243 ~ 87998848 (+)
G758954 NA non-coding downstream 59085 88001546 ~ 88010619 (+)
G758892 NA other upstream 64226 87875120 ~ 87876684 (+)
G758866 NA other upstream 207771 87732294 ~ 87733139 (+)
G758531 NA other upstream 223192 87716817 ~ 87717718 (+)
G758259 LOC106569763 other upstream 1006899 86933446 ~ 86934011 (+)
ly97.3 LOC106596797 other upstream 1020401 86912176 ~ 86920513 (+)
G758988 NA other downstream 49509 87991970 ~ 87995145 (+)
G759020 LOC106569827 other downstream 139560 88082021 ~ 88106947 (+)
G759031 LOC106569827 other downstream 166545 88109006 ~ 88110300 (+)
G759556 NA other downstream 755513 88697974 ~ 88701419 (+)

Expression



Co-expression Network