G758999


Basic Information

Item Value
gene id G758999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88020133 ~ 88021560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862416
AAGGTGGAGCAGGATCAACAACGTGAGATGAGGACTAGAAGTCAGGGCCAGCAAGGTGGAGCTGGATCAACAACGTGAGATGAGGAATAGAAGTCGGGGCCAGCAAGGTGGAGCTGGATCAACAACGTGAGATGAGGACTAGAAGTCGGGGCCAGCAAGGTGGAGCTGGATCAACAACGTGAGATGAGGACTAGAAGTCGGGGCCAGCAAGGTGGAGCAGGATCAACAACGTGAGATGAGGACTACACAAGGTGGAGCAGGATCAACAACGTGAGATGAGGACTACACAAGGTGGAGCTGGATCAACAACGTGAGATGAGGACTAGAAGTCG
>TU862415
GGATCAACAACGTGAGATGAGGACTAGAAGTCGGGGCCAGCAAGGTGGAGCTGGATCAACAACGTGAGATGAGGACTAGAAGTCGGGGCCAGCAAGGTGGAGCTGGATCAACAACGTGAGATGAGGACTAGAAGTCGGGGCCAGCAAGGTGGAGCAGGATCAACAACGTGAGATGAGGACTACACAAGGTGGAGCAGGATCAACAACGTGAGATGAGGACTACACAAGGTGGAGCTGGATCAACAACGTGAGATGAGGACTAGAAGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862416 False 332 lncRNA 0.53 3 88020133 88021560
TU862415 True 269 lncRNA 0.53 2 88020720 88021560

Neighbor

gene id symbol gene type direction distance location
LOC110513441 apcdd1 coding upstream 244686 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 328390 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 349029 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 470295 87532950 ~ 87549838 (+)
LOC110530822 LOC106596771 coding upstream 613688 87003179 ~ 87406445 (+)
LOC110510807 LOC106569716 coding downstream 603881 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 624840 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 865274 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 1053064 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 1073276 89094836 ~ 89113049 (+)
G758954 NA non-coding upstream 9514 88001546 ~ 88010619 (+)
G758989 NA non-coding upstream 21285 87997243 ~ 87998848 (+)
G758976 ankrd12 non-coding upstream 54208 87959523 ~ 87971929 (+)
G758974 NA non-coding upstream 61734 87957906 ~ 87958399 (+)
G758969 NA non-coding upstream 75904 87943123 ~ 87944229 (+)
G759005 NA non-coding downstream 12068 88033628 ~ 88034819 (+)
G759013 NA non-coding downstream 33531 88055091 ~ 88057598 (+)
G759014 NA non-coding downstream 34064 88055624 ~ 88055972 (+)
G759015 NA non-coding downstream 34443 88056003 ~ 88057223 (+)
G759016 NA non-coding downstream 50269 88071829 ~ 88072091 (+)
G758988 NA other upstream 24988 87991970 ~ 87995145 (+)
G758892 NA other upstream 143449 87875120 ~ 87876684 (+)
G758866 NA other upstream 286994 87732294 ~ 87733139 (+)
G758531 NA other upstream 302415 87716817 ~ 87717718 (+)
G759020 LOC106569827 other downstream 60461 88082021 ~ 88106947 (+)
G759031 LOC106569827 other downstream 87446 88109006 ~ 88110300 (+)
G759556 NA other downstream 676414 88697974 ~ 88701419 (+)
G759598 NA other downstream 839519 88861079 ~ 88861828 (+)

Expression


Co-expression Network