G759005


Basic Information

Item Value
gene id G759005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88033628 ~ 88034819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862422
ATATTGGGCCTATATGAATTCTAGCTGCTGATTTGAGATATAGCATATTGGGTCTATATGAATTCTAGCTGCTGATTTGAGATATAGCATATTGGGTCTATATGAATTCTAGCTGCTGATTTGAGATATAGCATATTGGGTCTATATGAATTCTAGCTGCTTTTGAAGCTAGCCAGCCAGTTGTGCTCTAGAAACTAATATTTAACCCTGTAAAGACGCGTTTATTATAAAAACCAAGAATGTTTATACAAAAACCCTTTCGTTGAAATTACAAAGAATACAAGGTTTCTACATTGGGTTAAAGCACTACCTATTGAGATGCTTTACATGGACAATTCTACACTGTCTCTTTAAGAGCATCACGTTTGTGAGTGACTACAGTATGTGCCAAGACATGAGTCATTCATTCATTGCTGTAATCATTGATCTTCTAAAGAAGATATCCCTTTTCTTTTCTTTCTGTGCCCCCAAAAGTAACCCGAttttgttagctagccagctaatgaggtaacatgactTAACAAGGTGTACTGGTAAAGtaaccaggttgttagctagctagctaatgaggttACATGACTTAACAAGGTGTACTGGTAAAGTAACCAGGttgttatagctagctagctaatgaggtaacatgactTAACAAGGTGTACTGGTAAAGTAACCAGGttgttatagctagctagctaacgaagtaacatgactTAACAAGGTGTACTGGTAAAGTAACCAGGttgttatagctagctagctaacgaagTAACATGACTTAACAAGGTGTACTGGTAAAGTAACCAGGttgttatagctagctagctaacgaggTAACATGACTTAACAAGGTGTACTGGTAAAGTAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862422 True 867 lncRNA 0.37 3 88033628 88034819

Neighbor

gene id symbol gene type direction distance location
LOC110513441 apcdd1 coding upstream 258181 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 341885 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 362524 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 483790 87532950 ~ 87549838 (+)
LOC110530822 LOC106596771 coding upstream 627183 87003179 ~ 87406445 (+)
LOC110510807 LOC106569716 coding downstream 590622 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 611581 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 852015 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 1039805 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 1060017 89094836 ~ 89113049 (+)
G758999 NA non-coding upstream 12068 88020133 ~ 88021560 (+)
G758954 NA non-coding upstream 23009 88001546 ~ 88010619 (+)
G758989 NA non-coding upstream 34780 87997243 ~ 87998848 (+)
G758976 ankrd12 non-coding upstream 67703 87959523 ~ 87971929 (+)
G758974 NA non-coding upstream 75229 87957906 ~ 87958399 (+)
G759013 NA non-coding downstream 20272 88055091 ~ 88057598 (+)
G759014 NA non-coding downstream 20805 88055624 ~ 88055972 (+)
G759015 NA non-coding downstream 21184 88056003 ~ 88057223 (+)
G759016 NA non-coding downstream 37010 88071829 ~ 88072091 (+)
G759017 NA non-coding downstream 42421 88077240 ~ 88077597 (+)
G758988 NA other upstream 38483 87991970 ~ 87995145 (+)
G758892 NA other upstream 156944 87875120 ~ 87876684 (+)
G758866 NA other upstream 300489 87732294 ~ 87733139 (+)
G758531 NA other upstream 315910 87716817 ~ 87717718 (+)
G759020 LOC106569827 other downstream 47202 88082021 ~ 88106947 (+)
G759031 LOC106569827 other downstream 74187 88109006 ~ 88110300 (+)
G759556 NA other downstream 663155 88697974 ~ 88701419 (+)
G759598 NA other downstream 826260 88861079 ~ 88861828 (+)

Expression


Co-expression Network