Gene
RNA
| Item | Value |
|---|---|
| gene id | G759013 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 88055091 ~ 88057598 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU862431 | False | 428 | lncRNA | 0.41 | 2 | 88055091 | 88055551 |
| TU862432 | False | 250 | lncRNA | 0.41 | 3 | 88055091 | 88057085 |
| TU862433 | True | 250 | lncRNA | 0.41 | 3 | 88055091 | 88057598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513441 | apcdd1 | coding | upstream | 279644 | 87745792 ~ 87775447 (+) |
| LOC110512127 | LOC106591122 | coding | upstream | 363348 | 87687931 ~ 87691743 (+) |
| LOC110512128 | LOC106596732 | coding | upstream | 383987 | 87569072 ~ 87671104 (+) |
| LOC110519501 | LOC106569361 | coding | upstream | 505253 | 87532950 ~ 87549838 (+) |
| LOC110530822 | LOC106596771 | coding | upstream | 648646 | 87003179 ~ 87406445 (+) |
| LOC110510807 | LOC106569716 | coding | downstream | 567843 | 88625441 ~ 88642762 (+) |
| LOC110510805 | LOC105030507 | coding | downstream | 588802 | 88646400 ~ 88667320 (+) |
| LOC118965580 | NA | coding | downstream | 829236 | 88886834 ~ 88903834 (+) |
| slc25a24l | LOC106569755 | coding | downstream | 1017026 | 89074624 ~ 89139486 (+) |
| fubp1 | LOC106569753 | coding | downstream | 1037238 | 89094836 ~ 89113049 (+) |
| G759005 | NA | non-coding | upstream | 20272 | 88033628 ~ 88034819 (+) |
| G758999 | NA | non-coding | upstream | 33531 | 88020133 ~ 88021560 (+) |
| G758954 | NA | non-coding | upstream | 44472 | 88001546 ~ 88010619 (+) |
| G758989 | NA | non-coding | upstream | 56243 | 87997243 ~ 87998848 (+) |
| G758976 | ankrd12 | non-coding | upstream | 89166 | 87959523 ~ 87971929 (+) |
| G759016 | NA | non-coding | downstream | 14231 | 88071829 ~ 88072091 (+) |
| G759017 | NA | non-coding | downstream | 19642 | 88077240 ~ 88077597 (+) |
| G759018 | NA | non-coding | downstream | 20484 | 88078082 ~ 88080468 (+) |
| G759019 | NA | non-coding | downstream | 23382 | 88080980 ~ 88081831 (+) |
| G759020 | LOC106569827 | non-coding | downstream | 24423 | 88082021 ~ 88106947 (+) |
| G758988 | NA | other | upstream | 59946 | 87991970 ~ 87995145 (+) |
| G758892 | NA | other | upstream | 178407 | 87875120 ~ 87876684 (+) |
| G758866 | NA | other | upstream | 321952 | 87732294 ~ 87733139 (+) |
| G758531 | NA | other | upstream | 337373 | 87716817 ~ 87717718 (+) |
| G759031 | LOC106569827 | other | downstream | 51408 | 88109006 ~ 88110300 (+) |
| G759556 | NA | other | downstream | 640376 | 88697974 ~ 88701419 (+) |
| G759598 | NA | other | downstream | 803481 | 88861079 ~ 88861828 (+) |
